FMO07688.5prime Sequence
1198 bp (986 high quality bases) assembled on 2008-11-03
> FMO07688.5prime
CAGTCGACATGACCCAATATCTGCCGCCGAATCTGCTGGCGCTGTTCGCG
GCACGGGAGCCCATCCCGTTCATGCCGCCGGTGGACAAGCTGCCGCACGA
GAAGAAGTCTCGCGGCTACCTGGGAGTGGCCAAGTTCATGGCCGATTTCG
AGGATCCCAAGGACACGCCGCTGCCGAAAACGGTGGAAACGCGTCAGGAG
CGGCTGGAGCGACGCCGGCGCGAGAAGGCCGAGCAAGTGGCCTACAAGCT
GGAGCGTGAGATAGCGCTGTGGGACCCCACAGAGATCAAAAATGCCACGG
AGGACCCGTTTCGCACGCTGTTCATTGCACGCATCAACTACGACACGTCC
GAGTCGAAGCTGCGGCGTGAGTTCGAGTTCTACGGGCCCATCAAGAAGAT
CGTCCTGATCCACGACCAGGAATCAGGTAAACCCAAGGGCTACGCCTTCA
TCGAGTACGAGCACGAGCGGGACATGCATGCCGCCTACAAGCACGCCGAT
GGTAAGAAGATCGACAGCAAGCGCGTCCTGGTGGACGTGGAGCGGGCTCG
CACGGTCAAGGGCTGGCTGCCCCGACGCCTGGGCGGCGGTCTGGGTGGAA
CGCGCCGCGGCGGCAACGATGTCAACATTAAGCACTCCGGCCGCGAGGAC
AACGAGAGGGAACGCGAGCGCTACCGGCTGGAGCGGGAGCGTGAGGATCG
CGAGGGTCCTGGACGCGGCGGCGGCTCCAATGGCCTGGATGCCCGGCCCG
GACGCGGTTTCGGTGCGGAACGTCGACGTTCCCGCTCCAGGGAACGCCGC
GACCGTGAACGAGATCGCGGACGGGGCGCTGTGGCTAGCAACGGTCGCTC
GCGCAGCCGTTCTCGCGAGCGCAGAAAACGACGAGCGGGCAGCCGGAGCG
GTACGACGAGTTCGACCGCCGCGATCGGCGGACAGGGAGCGCGAGCGTGA
TCGCCGATCGCGAGCGTGGGAAGAAAAGAGCGCTCCAAGTCTTCGCGAAC
GCGATCTCCATGGAGCGTCGCGACCGGAGCGAAGAGAGATGAATCGAGAA
CGCGGTCACCGGATCCGGCGGCATGTCAGACGGCAAGCCGATTCCGGGAT
TGATTCATCAGAATCAGGAGACCGTTCACATGCATCACATGGCATACGAA
CGCACCATCAGCCGTGGGATATCTGGCATGAGAGATATTAGTCAGAAT
FMO07688.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| snRNP-U1-70K-RC | 2948 | CG8749-RC | 197..1271 | 9..1078 | 4995 | 98.3 | Plus |
| snRNP-U1-70K-RA | 1834 | CG8749-RA | 197..1271 | 9..1078 | 4995 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6970395..6971462 | 1072..9 | 4760 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:00:14 has no hits.
FMO07688.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:14:46 Download gff for
FMO07688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snRNP70K-RA | 190..1283 | 1..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:44 Download gff for
FMO07688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snRNP-U1-70K-RA | 191..1284 | 1..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:32 Download gff for
FMO07688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snRNP-U1-70K-RA | 191..1284 | 1..1089 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:32 Download gff for
FMO07688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6970375..6971468 | 1..1089 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:44 Download gff for
FMO07688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6970375..6971468 | 1..1089 | 97 | | Minus |
