FMO07692.5prime Sequence
1210 bp (1035 high quality bases) assembled on 2008-11-03
> FMO07692.5prime
CAGTCGACATGAAGTACTTTTTGCTGGTGGGCCTGCTGCTCCTAGCAGGC
ATCAATCAAATAGCCGCCGATGACGAGGCCGCCACAACGGAGACCATCGA
CCTTGATCTGGGCTCCTTCAAGGAGGGCTCCCGCACCGATGCCGAGACCC
TGAAGCGCGAGGAGGAGGCCATCCAGCTGGACGGCCTGAACGTGGCGCAG
CTGAAGGAAATTCGCGAGAAGGCGAAGAAGTTTACTTTCCAAACGGAGGT
CAACCGCATGATGAAGCTGATTATCAACTCGCTTTACCGCAACAAGGAGA
TCTTCCTGCGTGAATTGATATCCAACGCCTCCGATGCCATCGACAAGATC
CGCCTATTGGCTCTGTCCAACAGCAAGGAGCTGGAAACGAATCCGGAGCT
GCACATCCGCATTAAGGCCGACAAGGAGAACAAGGCGTTGCACATCATGG
ACTCGGGTATCGGCATGACTCACCAGGATCTGATCAATAACCTGGGTACA
ATTGCCAAGTCCGGCACTGCCGATTTTCTGGCCAAGATGCAGGATCCCAG
CAAGTCGGAGGGACTCGATATGAACGACATGATTGGACAGTTCGGTGTGG
GCTTTTACTCCGCTTTCTTGGTCGCCGATCGTGTAGTGGTGACCACCAAG
CACAACGACGACAAACAGTACATCTGGGAGTCGGATGCCAACAGCTTCAG
CATCACCGAGGATCCCCGTGGCGATACTCTGAAGCGAGGATCCGTGATCT
CGCTGTATCTGAAGGAAGAAGCCCAGGACTTCCTGGAGGAGGACACCGTG
CGCGAGCTCATCCGCAAGTACTCGCAGTTCATCAACTTCCCCATCCGCAT
GTGGTCCAGCAAGACCGTCGAGGAGGAGTGCCCGTGAGGAGAGCCAGCCC
GAGAGAGCGAGGATGACGTGAGGATGAGACGCCAAGTCGAGGAGCCGAAG
ATGAAAAGCCCAGACCAAAAGTTTCGAGACCACCTGGGACTGGACCCTGA
TCACGACAGCAGCCCATCTGGACGCGCAAGCCCGCCGACTGACGAGATGA
GTACCCTAGCTTCTACAAGAGCTGACAGACTCCAGCGAGCCCTGACCCGA
ACGCCCTCATCGCCGAAGGGCGAGGTGACTCAGCTTGCCTCATGCCAAGG
TCACACTGGAATTCTTAACGCTTACGACAGTCTGAACACACTTAGCGCGG
TATCACGGTC
FMO07692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gp93-RA | 2841 | CG5520-RA | 151..1296 | 8..1129 | 5015 | 97.2 | Plus |
| Hsp83-RB | 2960 | CG1242-RB | 481..543 | 291..353 | 195 | 87.3 | Plus |
| Hsp83-RA | 2713 | CG1242-RA | 234..296 | 291..353 | 195 | 87.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27949340..27950211 | 220..1072 | 3465 | 96.9 | Plus |
| 3R | 32079331 | 3R | 27948982..27949073 | 47..138 | 460 | 100 | Plus |
| 3R | 32079331 | 3R | 27949170..27949254 | 138..222 | 425 | 100 | Plus |
| 3R | 32079331 | 3R | 27948861..27948902 | 8..49 | 210 | 100 | Plus |
| 3L | 28110227 | 3L | 3194580..3194642 | 291..353 | 195 | 87.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:20:34 has no hits.
FMO07692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:07 Download gff for
FMO07692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gp93-RA | 197..1349 | 1..1129 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:07 Download gff for
FMO07692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gp93-RA | 144..1296 | 1..1129 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:05 Download gff for
FMO07692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gp93-RA | 144..1296 | 1..1129 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:05 Download gff for
FMO07692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27948854..27948901 | 1..48 | 91 | -> | Plus |
| 3R | 27948984..27949073 | 49..138 | 100 | -> | Plus |
| 3R | 27949171..27949253 | 139..221 | 100 | -> | Plus |
| 3R | 27949342..27950273 | 222..1129 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:07 Download gff for
FMO07692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23774576..23774623 | 1..48 | 91 | -> | Plus |
| arm_3R | 23774706..23774795 | 49..138 | 100 | -> | Plus |
| arm_3R | 23774893..23774975 | 139..221 | 100 | -> | Plus |
| arm_3R | 23775064..23775995 | 222..1129 | 96 | | Plus |
