FMO07693.5prime Sequence
1223 bp (1047 high quality bases) assembled on 2008-11-03
> FMO07693.5prime
CAGTCGACATGGGAGACGAGCAGGACAAACGCACCGGCAAGGAGAAGCTG
CTCTTCTACACCACCGCCTTCTTCATCCTGCTGGGCACCTTCAGCCTGTT
CGCCTTCCTCTTCCTGGTGCCCTTCGTCATCGAGCCCGCCTTCACCACGA
TCTTCATGCAGTTCGAGGAGGTTCCGGCGCTCTGCGAAACGTACGACACG
GAGATCTACTACGGGGCCAAGAACTGTTCGTGGTCGTCCTGCCGCGAGGG
CTGCACCAAGGACATCTATACGTGCACCCAGATTCGGGTGAACTACCGTC
TCAATCTATATAACTTCACCGATGAGTTCAACTTCACGGAGTACCACATC
AATCTCAAGGAGGCGGAGCGCATCCTGCCGCCCGTCAAGCGAACGGATCG
CTATGAGAGAGCTCTGAGGAGCGACTACGAGTACGATAATCTGGGTGGTG
GCACCGGCTTGGACATCGACTTAGGCGCCGGCCGGATGGAACAGCTCAAT
TTTGGGGATGCCGACGGCTCCAATGGCTACCTCATTGAGGATTCGGAGGA
TACGCGCGGTCTGAGCGCTTCGGGTACCCTCATTTCGGACGAGCGGAGGC
CGTTCGACGAGATCTCCGAGCTGAACGAGGGCCTGATGGGGAACCGCTCC
ATGTACTACTATGTGGGAGCCAGGCTCTTTCCGAATGTAAAGGGCTGTGG
CTACCCGCCAATGCTCAACTGTACCATCTGGCTAAAGAGGTACACCAAGA
TCGGCATGAAGTTCCCCTGCTACTACTCCAAGGTGGACCCAAGTCTGGTC
ATCAGCGACCTGGACTACTGGCAGAACACCCTAAACTTGGTCTACTCGAT
GGCCATTCCAATACCCTCGTTCATCATCTCGGTGATTTATCTGACGTATG
CCTACTTCAAGATATACAACGAGGATGAGAGACGGCGCCGTTGGACAAGA
CGCCGAGGACATGGACATCGATGATATCGATGCCGTGGACGACAGCGATG
GTGCAGTCCTGGCGGACATGGTGCCGGTAGCCAAATCATTAACATGGACT
CAACCACCACGACGTTGTCTGGAGGTTTCCTGCCCACGCGTTCCCGGCAT
GACGCCCTCCATATCGCAAGGGTGTTCGTACACAGCCGGTTCGTACCTCG
GCAATTCGGCGTCGGATGACCAACTCGGAAATCACTCGTTCGTCCACCCG
TGAGAATCCAATGTAGGCCGACA
FMO07693.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tipE-RB | 3938 | CG1232-RB | 1045..2169 | 7..1124 | 5300 | 98.6 | Plus |
| tipE-RA | 3396 | CG1232-RA | 1191..2315 | 7..1124 | 5300 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4190590..4191709 | 7..1118 | 5115 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:18:54 has no hits.
FMO07693.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:09:05 Download gff for
FMO07693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tipE-RB | 1014..2148 | 7..1133 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:12 Download gff for
FMO07693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tipE-RA | 1191..2325 | 7..1133 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:14 Download gff for
FMO07693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tipE-RA | 1191..2325 | 7..1133 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:14 Download gff for
FMO07693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4190590..4191724 | 7..1133 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:12 Download gff for
FMO07693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4190590..4191724 | 7..1133 | 98 | | Plus |
