Clone FMO07702 Report

Search the DGRC for FMO07702

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:77
Well:2
Vector:pMK33-CFH-BD
Associated Gene/TranscriptmTerf3-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07702.5prime Sequence

462 bp (97 high quality bases) assembled on 2008-11-06

> FMO07702.5prime
TGACAAGAAGACCGAGCCTGCGGAATGTGAAGGCTCCAAAGAAGTGGCTC
TGGACTTCCGAAATCGGGAGGCCCATGTGCCTTCCTTCAATTTGGCGTCC
TATGTGAACAACTCGAGTACCCTGCAGCAATTTCTTAGCTTGGGAGTGGA
TCTGCACAGTATTGAACGGCGAAAGGGATTGGGAGACTTTGTACTGAAGC
TGGATTTCGAGAAAAAAGTGAAGCCCTACATAACGTTCCTGGTGGATCAG
GGCGTATCACCCGATGACTTCGGCAGGATGTTCACCAAGAACCCGCTGCT
GTTCAAGGAGGACTTGCACGATCTGCAGACCAGATTGAACTATCTAAAAA
GCAAGAGATTCTCGGACGAACCCAGGCAAAGAATTCTCACCCAGAATCCT
TATTGGCTGATGTTCTCCACCAGGCGAGTGGATCGTCGATTGGTTTACTT
CCAAAACGAGTT

FMO07702.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:09
Subject Length Description Subject Range Query Range Score Percent Strand
mTerf3-RA 1124 CG5047-RA 188..649 1..462 2190 98.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20520124..20520585 462..1 2190 98.3 Minus
Blast to na_te.dros performed on 2014-11-28 19:01:08 has no hits.

FMO07702.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:10:30 Download gff for FMO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
mTerf3-RA 160..621 1..462 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:14 Download gff for FMO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
mTerf3-RA 188..649 1..462 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:58 Download gff for FMO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
mTerf3-RA 188..649 1..462 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:58 Download gff for FMO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20520124..20520585 1..462 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:14 Download gff for FMO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20513224..20513685 1..462 98   Minus