FMO07710.5prime Sequence
604 bp (488 high quality bases) assembled on 2008-11-06
> FMO07710.5prime
CAGTCGACATGGAAGCGTGGAAACAGCTGCCAAACGGAGGGCGTTTCCTG
CTGCTTCTCCTGGCCTGCATCGCCCACCTGGGCCACCCAATCCTCGCCTG
GCGCCCCTGTCCGGAGCTCAGTTCCGCCCTCCGTCTGCCATGCAGGTGCA
ATGTGGTTCCGTTTGCGGCGATTGGCCAACTGGGAGCCGTGGCCATGGAC
TGCGATCGCGTTGTCTTCCACGGCGATGCCCCGCAACTGCCTTATGGAGC
GCCCATCGTGGCGTATACACAACGTCACAGCGGCCAACAGGTGCTGCCCG
CCCAGACTTTTGGTCAACTCAAACTGACCATTGAGGAGCTGGATCTGTCC
TACAATCTCATCCGAAGGATACCGGAGAAGGCATTCGATGGCCTCAAGGA
TTCGCTGAACGAACTGCGACTGGCGAACAATTTGTTGGGCGACAATCTGA
ATCCCATCTTCTCCACCGCCGAACTGCATGTGCTGAAGAACCTGCGTCTC
CTGGATTTGTCCGGAAACAAGATCAAGCTGATCGAGGAGGGTCTTCTCAA
GGGGTGTATGCATCTGAAGGAGTTCTACATCGATCGCAATAGCCTGACAT
CGGT
FMO07710.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7896-RA | 4955 | CG7896-RA | 525..1125 | 4..604 | 2960 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29986310..29986611 | 303..604 | 1495 | 99.7 | Plus |
| 3R | 32079331 | 3R | 29985914..29986076 | 143..305 | 800 | 99.4 | Plus |
| 3R | 32079331 | 3R | 29985594..29985737 | 5..148 | 705 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:41:19 has no hits.
FMO07710.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:10:34 Download gff for
FMO07710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7896-RA | 496..1099 | 1..604 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:23 Download gff for
FMO07710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7896-RA | 522..1125 | 1..604 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:33 Download gff for
FMO07710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7896-RA | 522..1125 | 1..604 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:33 Download gff for
FMO07710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29985591..29985734 | 1..145 | 98 | -> | Plus |
| 3R | 29985917..29986076 | 146..305 | 99 | -> | Plus |
| 3R | 29986313..29986611 | 306..604 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:23 Download gff for
FMO07710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25811313..25811456 | 1..145 | 98 | -> | Plus |
| arm_3R | 25811639..25811798 | 146..305 | 99 | -> | Plus |
| arm_3R | 25812035..25812333 | 306..604 | 99 | | Plus |
