FMO07712.5prime Sequence
1049 bp (707 high quality bases) assembled on 2008-11-06
> FMO07712.5prime
CAGTCGACATGGAGCCCCCAGCTGCTGGCAATCTGCTGGAGATCATGGAC
CTGGCCCGCACTCTCCGCCAGGAGCAGCTCTTCATCCAGCAGGAGCAGGC
GGCCTTTGCCCAGCTCACTGGAGCCTTTGAGAGCAATGCAGGGACCATAA
CCAAGTTGGCCTTTGTGTGTGCCCAGCAGCGGCAGATACTCAATGAGCTG
CTCCTGGCGCGCACAGATCAGGATCCGCTGCTCTTCTGCCGCCGAGCGAG
TGCCTACGATAGTGCCCAATTCGTGGACGCCAAGCAGTTGCTGCCCTATG
AGCACGCCTTGGCCTACGAAGATCTGTTCAACTACTTGTATAATACACCC
TATTTGTTGGCCCTATCCCTGGCCACCGCGGATCGCTTATCCCTGCTCTC
GGCCAGCCAGCTTGGCCAAATTATTAATACCATATCGACGGGACTGTATG
GCAATGCCATCAATACCAAGGATGTGGAACTGCTGCTTAAATTGCTGCGG
GAACTGATTGAAATCCAATTGCTGACCAGCGAACATCCCAGACGTTTGCT
GAGAACCAATAGCAGCTCCTTTGCCCGACTGTATCACCGATTGGTTGAGA
GTCTGTTCTCGGCGAGAATTTTCCTAACCGCCGCGCTCCATGCACCGCTC
ATGGGTGTGCTGAGTGAGCACGAGAATTTGGCTGGATCTGGATCCGCACA
ACTAATGCAGACCTTCACGCCCAAGGAGCGGGAGAAGCGCTTTGGTCGCG
AGGGTGATGAGGCATACCAGCGAAATGTGGCTCGCTTTCATGCGGAAACT
TTGGGGCAACCTGCCCTCCCCATGTCCAAAAGTTTGTGAAGAGCTTGGCA
AAGATTTGGGCCCTATTTCCCAACTCTCTTAAAATGGCTACTCCAAACAC
GGACCAAAGCTCGGGAGTCCTTTGCGCCACGAAGGAACTGGTGAGATCCG
CCAGCTGCTCCTGGACTGTGGTGTTCACACACTTCTTTTCCCAGCCATTG
GCCGTGTGTGAATCTCCTGGGGCATCATACATGCTTATGGGGAGTGACC
FMO07712.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1657-RA | 5830 | CG1657-RA | 148..1161 | 8..1028 | 4280 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11328474..11329070 | 301..900 | 2515 | 96.5 | Plus |
| X | 23542271 | X | 11328045..11328196 | 8..159 | 745 | 99.3 | Plus |
| X | 23542271 | X | 11328259..11328407 | 154..302 | 745 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:41:56 has no hits.
FMO07712.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:10:31 Download gff for
FMO07712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1657-RA | 63..1065 | 1..1006 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:51:59 Download gff for
FMO07712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1657-RA | 140..1142 | 1..1006 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:18 Download gff for
FMO07712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1657-RA | 140..1142 | 1..1006 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:18 Download gff for
FMO07712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11328037..11328192 | 1..155 | 97 | -> | Plus |
| X | 11328261..11328407 | 156..302 | 100 | -> | Plus |
| X | 11328476..11329175 | 303..1006 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:51:59 Download gff for
FMO07712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11222294..11222440 | 156..302 | 100 | -> | Plus |
| arm_X | 11222070..11222225 | 1..155 | 97 | -> | Plus |
| arm_X | 11222509..11223208 | 303..1006 | 94 | | Plus |
