FMO07717.5prime Sequence
1136 bp (963 high quality bases) assembled on 2008-11-06
> FMO07717.5prime
CAGTCGACATGGAGAACGGAGTGGAACATGGTGTGGACGAGTCAGGCGAG
AACCAGGTGCTGAGCAGTTCCGATGGCGAGGGAGACTGTGATGGTGACGG
TGAAGTGGAGGGGGAGGTGCTGCAGCCGCCGCCGCCGCCGCCACTGCAAA
TAACAAACGATTGTGTTGGCGAAGGGGTGCAAGCGGAGGAGGGGGAGCGT
GCACCAGCGACGACCGGAGCTGTGGACGTCACTCCGGACCCTGGGCCACC
GCCCACGGATGGTGCAGCACCTGTAGCCATACTGGAGGACAACATGTGCG
ACAAGGATGTGGATAGCGATGCTGGCGACGAGGACAACGACGATGAGACC
AAGGAGAACTACGAGGGCTTCAATGGCACCGGACGCACCGTCACACTGCA
AACGCTGATGGCTGCCAATGTCCTGCAGCCGGGCCTGGGCTTAATGACTA
TCGAATATCTGGGCCAGAAGTTCGTTGGCGATCTACTGGCCGACGGTAAG
ATCAAATCCCATGAGACTGAGACAATATTCCTCACGCCCAGCGCCTGGGC
AATGCACTGCAAGCGGATCATCAATCCGGACAAGAAGAGCGGCTGCGGCT
GGGCCTCGGTCAAGTACAAGGGAAAGAAGCTGGACGCCTACAAGAACACG
TATTTGCGAAAGTGCGCGTTGCAAAAGGAGACGCCGCTAGATGATTGTGA
ACTGGATGCTGAACGCAAGACTGACACCCCGGAGATTGTCGTCAAGCGAA
CCGTTTTCGCACATAATACCGTTTCGAATCGCAACGTAGTACACGACGCC
AAACATGTTGATTGAATGGGTGCCGTTTACTTCGGGTGGGGGAAATTGCA
GCCCTTCCTCATTACAGTGAACTCCTCTGCCCTCTTGCTGGCGGATTTTC
ACTGCCACTTTGACGGGTGCGTGAGGTGTGCGGCTATCTAGGGTGCACCT
GGACATGACACCACACCCCTCTATCAATCACAAAGACCTATCCTTGTCGC
TGCACGGCGCCTTTGGATCGAACAGCGTGCCGGCGAAGTGGAACCGTGAA
TATTTCAAAAGATGAATGATCCAGGAATCAAATGGCTGTTGGATTGAATG
GTATCACTCGCCATTCCCAGTTTCAAGGCGGAAACT
FMO07717.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4751-RA | 4883 | CG4751-RA | 128..1235 | 8..1133 | 4880 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11131262..11131621 | 346..705 | 1800 | 100 | Plus |
| 2L | 23513712 | 2L | 11130864..11131203 | 8..347 | 1700 | 100 | Plus |
| 2L | 23513712 | 2L | 11131894..11132040 | 802..952 | 530 | 94.7 | Plus |
| 2L | 23513712 | 2L | 11131674..11131762 | 705..793 | 445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:29 has no hits.
FMO07717.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:18 Download gff for
FMO07717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4751-RA | 116..1234 | 1..1136 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:06 Download gff for
FMO07717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4751-RA | 120..1238 | 1..1136 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:10 Download gff for
FMO07717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4751-RA | 120..1238 | 1..1136 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:10 Download gff for
FMO07717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11130856..11131203 | 1..347 | 98 | -> | Plus |
| 2L | 11131264..11131621 | 348..705 | 100 | -> | Plus |
| 2L | 11131675..11131762 | 706..793 | 100 | -> | Plus |
| 2L | 11131887..11132056 | 794..968 | 92 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:06 Download gff for
FMO07717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11130856..11131203 | 1..347 | 98 | -> | Plus |
| arm_2L | 11131264..11131621 | 348..705 | 100 | -> | Plus |
| arm_2L | 11131675..11131762 | 706..793 | 100 | -> | Plus |
| arm_2L | 11131887..11132056 | 794..968 | 92 | -> | Plus |
