FMO07724.5prime Sequence
1135 bp (1041 high quality bases) assembled on 2008-11-06
> FMO07724.5prime
CAGTCGACATGGCCTATCGGAAGCCCAGCGACCTGGATGGCTTTATCCAG
CAAATGCCCAAGGCGGACATGCGTGTGAAGGTACAGCTCGCCGAGGATCT
GGTGACATTCCTTAGCGACGACACAAACTCAATTGTCTGCACGGACATGG
GATTCCTTATTGACGGTTTGATGCCATGGCTGACGGGCAGCCACTTTAAG
ATTGCACAAAAGTCCCTGGAGGCGTTCTCGGAGCTAATAAAGCGATTGGG
CAGCGATTTTAATGCATACACGGCTACCGTTCTGCCACATGTGATCGATC
GGCTGGGAGACAGCAGGGACACAGTCCGCGAGAAGGCGCAACTTCTGCTG
CGCGACCTCATGGAGCACAGAGTGCTTCCGCCCCAGGCGCTGATCGACAA
GCTGGCCACTAGCTGCTTCAAGCACAAGAACGCCAAGGTGCGCGAGGAGT
TCCTTCAGACGATTGTGAACGCTCTTCATGAGTACGGCACCCAGCAGCTT
AGTGTTCGCGTCTATATACCACCAGTTTGTGCACTTCTCGGAGATCCCAC
AGTTAATGTGAGGGAGGCGGCCATCCAAACGCTAGTGGAAATCTACAAGC
ATGTAGGGGATCGATTGCGCCCAGACCTCCGTCGCATGGACGATGTTCCT
GCCTCGAAATTGGCTATGTTGGAGCAAAAGTTCGACCAGGTCAAACAGGA
GGGTCTACTGCTACCTTCAGCCCTTAAAAACACGAATGGCAATGGAGTGG
GCTTGGACGAGGCCGACAATATTGGGTTGAGGGAGCGACCCACCAGGATG
ATAAGCGGCCACTACACTCGGCCGTTTCGTCATCACTGCGCTCAAAACCC
AATGTGAACGATGTGACCGGTGATGCCGGCGCCGTAACCATGGAATTTTT
CGAATCTAGCTTTGAGGTGGTCCCGCATTGAACATCTTCCACGCTAAGGA
CATGGACGATATCTACAAGCAGTACTAGTGATCATCAGTGATAAAACGGC
AAGACTGGGGAGAACCGTGTGGATGCTCTCAAGAAGATCAGGCCATTGCC
TCATTCTCAGCTTATCCAACCTCAGCGCAGTTGTTCCCTGTACAGCTAAA
AGGATTGTCCGTTAAAGCCTTCCGGGAACTTTCCT
FMO07724.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chb-RC | 5264 | CG32435-RC | 119..1223 | 9..1115 | 5110 | 97.9 | Plus |
| chb-RA | 5930 | CG32435-RA | 785..1889 | 9..1115 | 5110 | 97.9 | Plus |
| chb-RB | 5375 | CG32435-RB | 230..1334 | 9..1115 | 5110 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21178133..21179232 | 9..1109 | 4900 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:15:44 has no hits.
FMO07724.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:24 Download gff for
FMO07724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chb-RC | 109..1228 | 1..1122 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:52 Download gff for
FMO07724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chb-RB | 220..1339 | 1..1122 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:04 Download gff for
FMO07724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chb-RB | 220..1339 | 1..1122 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:04 Download gff for
FMO07724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21178123..21179242 | 1..1122 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:52 Download gff for
FMO07724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21171223..21172342 | 1..1122 | 97 | | Plus |
