Clone FMO07728 Report

Search the DGRC for FMO07728

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:77
Well:28
Vector:pMK33-CFH-BD
Associated Gene/Transcriptin-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07728.5prime Sequence

655 bp (655 high quality bases) assembled on 2008-11-06

> FMO07728.5prime
CAGTCGACATGCGCAAATCGCCGGCCAGCCTGCCGTCGGAGGCCTTCTCC
AGTTCGAACTCCTCGCTGAGCAACTCGTACAGCGATGGCAGCGACCTGGC
CAACTGGGAGGAGTACGTGTCCACAGACGGCAGTCTCTTCTACATGGAGT
ATGTGCGATGTGAGAAGACTGGCGTCTCGGCAGAGCGGCGGGTGGAGTTC
ATGCGTCGATCGCTGCGCCTGGGAAAGAAGTCGTCGCGTCGCCAGCCGCA
CAGCAATAATCAGAATCAGAGTCAGAACCAAAACCAGTCCCACGGCCCGA
GCAGGTTGGATAGCCAGACGGAGCCGCAAGAGTTCCGCTTCTCACAGTTC
AAGACGGCTGCCCCCGATCCCAAGAAACTGGATCTGGTGATCACAGCCGC
TGATCGCTTCCGTTTCGGACGACGATCCACGGCGGTGGAGTCCATACTGG
GCTTCCGGGTCCTGCCCTTTCCGGACCAACCAGAATGCCTGATGGTCGAT
GGGTTCGTTCACGATGTGAGTGCGCTGCAGCACGGCATCTAGCGGGGAGA
TTGGTTTAGATCCCTGAATGGCATACAGGTGTACGCCAGCAATGTGGATG
AGTTGCTCAAGCATTTCGTGAAGCCCACTCAGGTGTGCCTAGGCTTCCAG
TCTTG

FMO07728.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:35
Subject Length Description Subject Range Query Range Score Percent Strand
in-RA 3062 CG16993-RA 119..762 9..652 3160 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20367316..20367959 9..652 3160 99.4 Plus
Blast to na_te.dros performed on 2014-11-28 23:10:34 has no hits.

FMO07728.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:05 Download gff for FMO07728.5prime
Subject Subject Range Query Range Percent Splice Strand
in-RA 108..763 1..655 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:06 Download gff for FMO07728.5prime
Subject Subject Range Query Range Percent Splice Strand
in-RA 110..765 1..655 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:23 Download gff for FMO07728.5prime
Subject Subject Range Query Range Percent Splice Strand
in-RA 110..765 1..655 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:23 Download gff for FMO07728.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20367307..20367962 1..655 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:06 Download gff for FMO07728.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20360407..20361062 1..655 98   Plus