FMO07730.5prime Sequence
1151 bp (1069 high quality bases) assembled on 2008-11-06
> FMO07730.5prime
CAGTCGACATGGCGTTACTCTACCGACGCATGTCGATGCTATTAAATATA
ATTCTTGCATATATTTTCCTTTGTGCGATATGTGTGCAAGGATCTGTGAA
ACAAGAGTGGGCAGAAATAGGTAAAAACGTATCTCTAGAGTGCGCATCTG
AAAACGAAGCAGTAGCATGGAAGCTGGGCAACCAAACTATTAATAAAAAC
CATACAAGATATAAAATAAGAACTGAGCCATTGAAATCCAACGACGATGG
CAGTGAAAACAACGATAGTCAAGACTTCATCAAGTATAAGAATGTCCTGG
CGCTTCTCGATGTCAATATAAAGGACTCGGGGAACTACACATGCACAGCC
CAAACGGGGCAAAACCATTCGACTGAATTCCAAGTTAGGCCATACCTTCC
ATCCAAAGTCCTGCAAAGTACCCCCGATAGGATTAAGAGAAAAATCAAGC
AGGATGTCATGTTGTACTGTTTGATCGAGATGTACCCACAAAATGAGACA
ACTAATAGAAACCTCAAGTGGCTTAAGGACGGCAGCCAGTTTGAATTCCT
GGACACCTTCTCGTCCATTTCGAAGCTAAACGATACGCACTTAAACTTCA
CCCTGGAATTCACAGAAGTTTACAAGAAAGAGAATGGCACCTACAAGTGC
ACCGTCTTCGATGACACCGGACTCGAAATTACCTCCAAAGAGATTACCCT
TTTCGTAATGGAAGTGCCACAAGTTAGCATTGATTTCGCCAAGGCAGTTG
GTGCTAATAAAATATACCTAAATTGGACCGTTAACGACGGCAACGATCCA
ATTCAGAAGTTCTTCATCACTCTGCAGGAGGCTGGAACACCGACTTTTAC
TTATCATAAGGACTTTATTAACGGCAGCCATACATCGTATATTCTGGACC
ATTTCAAGCCGAACACAACCTATTTTTTAAGAATCGTGGAAGACTCGATT
GGCAATGGCCAACCCACCCAGTATCCCCAGGGAATCACCACGCTAGTATG
ATCCCATATTTATACCAAAGTCGAGACCACGGGCAGCCACGGCGTCCACG
ATACGATGCCTGGAATCCACGCCCCCTGATCTCATGATATATACAATACT
ACGACTGAATGTTCTCCGATCCGGCCGAGGCCAAATGATCGAAGCATACA
G
FMO07730.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp69D-RB | 5165 | CG10975-RB | 208..1358 | 8..1144 | 5225 | 97.7 | Plus |
| Ptp69D-RA | 5168 | CG10975-RA | 208..1358 | 8..1144 | 5225 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12736251..12737102 | 207..1053 | 3945 | 98.6 | Plus |
| 3L | 28110227 | 3L | 12736056..12736160 | 104..208 | 525 | 100 | Plus |
| 3L | 28110227 | 3L | 12735152..12735249 | 8..105 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:00:53 has no hits.
FMO07730.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:20:29 Download gff for
FMO07730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RB | 199..1332 | 1..1125 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:06 Download gff for
FMO07730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RA | 203..1336 | 1..1125 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:50 Download gff for
FMO07730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp69D-RA | 203..1336 | 1..1125 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:50 Download gff for
FMO07730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12735147..12735249 | 1..105 | 96 | -> | Plus |
| 3L | 12736058..12736160 | 106..208 | 100 | -> | Plus |
| 3L | 12736253..12737165 | 209..1111 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:06 Download gff for
FMO07730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12729353..12730265 | 209..1111 | 97 | -> | Plus |
| arm_3L | 12728247..12728349 | 1..105 | 96 | -> | Plus |
| arm_3L | 12729158..12729260 | 106..208 | 100 | -> | Plus |
