FMO07731.5prime Sequence
1140 bp (1050 high quality bases) assembled on 2008-11-06
> FMO07731.5prime
CAGTCGACATGATAACTGCTAAGAAGCACCCGCTGGACAATTGCCAATTG
TTTGTCCAGCTGAAGAAGTTATTTCATGACTACAACGAGAAGGTCCAGCG
TCTGAAGGACATGATTTACTGGAGTGGAAACGATGAGCACATTGCGAAGA
TCTGCGACCAAGTGACGGACCTGCTGGTGGAGCACGATCTAATCATACAG
CCGCCAGACACAATGGATCCTTGTGCTATGAATCACCTGCGTGGACTACT
GGTGTACCTGGTGCTGAACACTGCACACGATGATATCCAGTGCGAATCGC
AGTGGAGCGCCAATGTCATGCATTTGTGTAACCAGCTGCCGCCTATCCCA
CTGTTCTTGACCATCGCAATAGCCGTTAACTGCTGTCTCATGGAGCCGCT
GGAGGAATTCCTTGCTTGTGGACCCCGCTGGCTGACCATCCAGTATTTTG
AGGCATTCAATGAGGCTCTGTCGGTCATTAATTCAGATTGCGTGGAAACA
CTACCGCTGCTCTCTGCCGCCCTCAGAGCAGCCGGTCGCGCAATTGTCAA
CTGCAATTTGCCCGCAGAAAATAAGCAACTGCTGCGCCAGATAGCCTGCA
TGGAACATCGTCATATCTTGGACTCTAAACAGCGCCTCCATACGCTGCCG
CGTCCATCCACTCGAAAGATTTACCTGGCCAAGGCTATGGATCACCTTAT
AGAAGTCCTTTTGTATACCCTCAATGATCCATTAAAGCGGGAGAAACCAA
ATTGCTTCGCCGTCTACAGCCAAATAACCGAGGACATCAGTGACAGCAAC
TCAAGCGATCCCATGCCTGATCTGCGGCATTTCGCCCAAATACTGCTAGA
CGTTCTGCAGCGTATCTTTCAGCTCGTAGCGTAGACACGTATATGTATTG
GCATGAAATGAAATCGAAAAGTGCTTTGTATACTGCCAGGAGCTAATCTG
TAGACAGACGGCAGAATTGCTTAAAGTACTCCAATCAGATAGTTGCTCGG
AAGAGCATCCGGTTTGCAAGCAGATGCTAAGCTTTGCGATGCAGCAAAAA
CATGGAGCAGCGCGTTGCGAAATGAGAATCGGTGAACTCTTTGCCTTTAT
CGATCGTATGCACCAATGAGGAGTGCTCGCCCGGCCTGAC
FMO07731.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2941-RB | 3954 | CG2941-RB | 306..1443 | 9..1135 | 5315 | 98.4 | Plus |
CG2941-RA | 3378 | CG2941-RA | 306..1443 | 9..1135 | 5315 | 98.4 | Plus |
CG32786-RB | 3307 | CG32786-RB | 214..1351 | 9..1135 | 4880 | 95.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3936992..3937975 | 126..1104 | 4515 | 98.9 | Plus |
X | 23542271 | X | 3941230..3942213 | 126..1104 | 4290 | 97.4 | Plus |
X | 23542271 | X | 3945426..3946409 | 126..1104 | 4260 | 97.2 | Plus |
X | 23542271 | X | 3936822..3936940 | 9..127 | 595 | 100 | Plus |
X | 23542271 | X | 3941060..3941178 | 9..127 | 400 | 89.1 | Plus |
X | 23542271 | X | 3945256..3945374 | 9..127 | 400 | 89.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:48:34 has no hits.
FMO07731.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:01 Download gff for
FMO07731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2941-RA | 296..1445 | 1..1140 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:46 Download gff for
FMO07731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2941-RA | 296..1445 | 1..1140 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:39 Download gff for
FMO07731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2941-RA | 299..1448 | 1..1140 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:39 Download gff for
FMO07731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3936815..3936939 | 1..126 | 97 | -> | Plus |
X | 3936993..3938017 | 127..1140 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:46 Download gff for
FMO07731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3831026..3832050 | 127..1140 | 98 | | Plus |
arm_X | 3830848..3830972 | 1..126 | 97 | -> | Plus |