Clone FMO07731 Report

Search the DGRC for FMO07731

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:77
Well:31
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG2941-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07731.5prime Sequence

1140 bp (1050 high quality bases) assembled on 2008-11-06

> FMO07731.5prime
CAGTCGACATGATAACTGCTAAGAAGCACCCGCTGGACAATTGCCAATTG
TTTGTCCAGCTGAAGAAGTTATTTCATGACTACAACGAGAAGGTCCAGCG
TCTGAAGGACATGATTTACTGGAGTGGAAACGATGAGCACATTGCGAAGA
TCTGCGACCAAGTGACGGACCTGCTGGTGGAGCACGATCTAATCATACAG
CCGCCAGACACAATGGATCCTTGTGCTATGAATCACCTGCGTGGACTACT
GGTGTACCTGGTGCTGAACACTGCACACGATGATATCCAGTGCGAATCGC
AGTGGAGCGCCAATGTCATGCATTTGTGTAACCAGCTGCCGCCTATCCCA
CTGTTCTTGACCATCGCAATAGCCGTTAACTGCTGTCTCATGGAGCCGCT
GGAGGAATTCCTTGCTTGTGGACCCCGCTGGCTGACCATCCAGTATTTTG
AGGCATTCAATGAGGCTCTGTCGGTCATTAATTCAGATTGCGTGGAAACA
CTACCGCTGCTCTCTGCCGCCCTCAGAGCAGCCGGTCGCGCAATTGTCAA
CTGCAATTTGCCCGCAGAAAATAAGCAACTGCTGCGCCAGATAGCCTGCA
TGGAACATCGTCATATCTTGGACTCTAAACAGCGCCTCCATACGCTGCCG
CGTCCATCCACTCGAAAGATTTACCTGGCCAAGGCTATGGATCACCTTAT
AGAAGTCCTTTTGTATACCCTCAATGATCCATTAAAGCGGGAGAAACCAA
ATTGCTTCGCCGTCTACAGCCAAATAACCGAGGACATCAGTGACAGCAAC
TCAAGCGATCCCATGCCTGATCTGCGGCATTTCGCCCAAATACTGCTAGA
CGTTCTGCAGCGTATCTTTCAGCTCGTAGCGTAGACACGTATATGTATTG
GCATGAAATGAAATCGAAAAGTGCTTTGTATACTGCCAGGAGCTAATCTG
TAGACAGACGGCAGAATTGCTTAAAGTACTCCAATCAGATAGTTGCTCGG
AAGAGCATCCGGTTTGCAAGCAGATGCTAAGCTTTGCGATGCAGCAAAAA
CATGGAGCAGCGCGTTGCGAAATGAGAATCGGTGAACTCTTTGCCTTTAT
CGATCGTATGCACCAATGAGGAGTGCTCGCCCGGCCTGAC

FMO07731.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG2941-RB 3954 CG2941-RB 306..1443 9..1135 5315 98.4 Plus
CG2941-RA 3378 CG2941-RA 306..1443 9..1135 5315 98.4 Plus
CG32786-RB 3307 CG32786-RB 214..1351 9..1135 4880 95.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3936992..3937975 126..1104 4515 98.9 Plus
X 23542271 X 3941230..3942213 126..1104 4290 97.4 Plus
X 23542271 X 3945426..3946409 126..1104 4260 97.2 Plus
X 23542271 X 3936822..3936940 9..127 595 100 Plus
X 23542271 X 3941060..3941178 9..127 400 89.1 Plus
X 23542271 X 3945256..3945374 9..127 400 89.1 Plus
Blast to na_te.dros performed on 2014-11-28 22:48:34 has no hits.

FMO07731.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:01 Download gff for FMO07731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2941-RA 296..1445 1..1140 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:46 Download gff for FMO07731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2941-RA 296..1445 1..1140 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:39 Download gff for FMO07731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2941-RA 299..1448 1..1140 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:39 Download gff for FMO07731.5prime
Subject Subject Range Query Range Percent Splice Strand
X 3936815..3936939 1..126 97 -> Plus
X 3936993..3938017 127..1140 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:46 Download gff for FMO07731.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 3831026..3832050 127..1140 98   Plus
arm_X 3830848..3830972 1..126 97 -> Plus