FMO07739.5prime Sequence
1030 bp (864 high quality bases) assembled on 2008-11-06
> FMO07739.5prime
CAGTCGACATGATCCACTGGAGACTTCTTTCCGCCCTACTTGTGGGCCTG
GCTATAGCTTTAACGCTTCCAGTCGACGGGGAGCTCTTGGCCAGATCGCC
GGCCAGCGTCTCGAGTAACCGCTTTGGCCTACGCCTAACTACTAAGTTGG
GACTAACTCAACCAGATGCAAATGTGGTGGTTTCCCCCTTGCTTATACAG
GCGGCGCTCAGCCTGCTGTATGCGGAAAGTTTTTCGGAGTACGGTAGCCA
ACTCCGCCAGGCTCTGGAGCTGACCCACGCCAGTCACCCGAAGCTTGCGG
TGCAGGACTTCGAGACCCTTTTGACGGACCTCAAGCAGTCGGCTGCCATT
GGCTGTCGCTTGCGGTTGCTGAGTGACCTCTACGCACAGCAGCGCTTCAC
CTTCAACTTCCGCAATGAATTCGAGACCTTGGCCGCCCGAATGGGCGTCG
GCTGCCACCGCTTGTCGTGGGAAAGTGCGTCGAACGCGGCCCAGGATATC
AACTACGCCTTCCTTAGCCGCAGCAACTTCAGCCTGGGGGAGCTCGTCAG
TGCCCCCCAACTCGAGTCCTTGGCCGAGCACAACACGCCCTTTTTACACG
TCTCGGGAGTCACCTTCCGAGCCCCTTGGGCTTGGGCCTTCGATTCTACC
GAGACGCAGAGCATCAACTTCTTTGCCGGGGGAAATCGCCCCAGGCTGGT
GGATGCCATGTTCGGACAGCACCGCTACAGGCACGCTGAAGTGCCCGCTC
TGGACGCCCAGCTCATTGAGGTGCCCTTCGCCACTGCAGACCCTCCGAAT
GCTCATTTGTATTTCCCCAATCGGGCCTGATGGGCCTGGCCCCAACTTGA
GAGGAAGCTGGCGCAGTCCGATCTCCACCAGCTAATGGTCCCAGCTCGAG
GAGCGCAAGGTGGCCATCACTCTGCCCAGCCTCAAATGCTAGTCCACTCC
GACCTGAGCCAGTGCTCGAGGGATTGGTCTTGGAAAACTATTTCACATCG
GAAGGTCCCACCTGGAGCGAGGTTTCTTCA
FMO07739.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn43Ad-RA | 1432 | CG1859-RA | 65..1073 | 7..1023 | 4555 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7154416..7155360 | 957..7 | 4255 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:00:50 has no hits.
FMO07739.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:16:52 Download gff for
FMO07739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn43Ad-RA | 59..1028 | 1..977 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:05 Download gff for
FMO07739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn43Ad-RA | 61..1030 | 1..977 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:49 Download gff for
FMO07739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn43Ad-RA | 61..1030 | 1..977 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:49 Download gff for
FMO07739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7154401..7155364 | 1..971 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:05 Download gff for
FMO07739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3041906..3042869 | 1..971 | 97 | | Minus |
