FMO07740.5prime Sequence
1060 bp (700 high quality bases) assembled on 2008-11-06
> FMO07740.5prime
CAGTCGACATGTCGGAGGCTACCATTGAGCTGGACTCGAGCATCGCCGTG
GCACCCAAGTGCTCCAATGTGAACAACAACAATAGTGCCCGCTCCAGTCG
GGTGGGCAGCTCCATCTCCGGACCGGATTCGGATGCGGAGTGCCAGCGAT
TTGGATGGTGCGGCTGGAATCCGGCGTGGCTACAGCGCTTCTGCACCGCC
AAATGGGCTCTTTTCTGGCTCTGCTGGGGCGGTGCTCTCCAAGGTCTCAT
CGTGAACGGCCTGATCAATGTGTCCATCTCCACCATCGAGCGTCGCTTTG
GACTTCGCTCCCGGCAAATGGGACTGGTGGCCAGTGGCTACGATCTGGCC
TCCTTCGCCTGCCTAGTACCAGTTACCTACTACGGCGGACGACGTGGTGC
CTCCAAGCCGCGCTTCATCGCCATCGGACTGATTGTGATGGGCATGGGAT
CGCTGGTCTTCCTGCTGCCCAATTTCCTGGTGGGTAACTACCGGGCCACT
ATTGCCGAGGCCAATGTGTGCGAGACAACGGGATTGCCGTTCAACTCCAA
CTCCAGCCAGTCGATGACCGCTTGCGAACTGAACGCAATGGGGGAGGGGC
AGAGCGAGAATCTGACCTGGACAGTGTGGCTCTTCCTGGCCGCCCAATTG
CTCCACGGAGCCGGAGCATCGCCCCTCTTTTACGCTGGGCGTCCATATAT
CGATGATAACGTCTCAAAGAAGATGTCATCTGTTTACTTTGGCCTCTACT
ACACAATTGCCAACCGTTGGACCAGCGATTGGCTTAGTATTCGGTGGACA
ACTGCTGCTCATCATACGGATTGGATGACGTGGATCCCCGATCACTCAAC
CTGACCATCACAGCAGGTGTGGATTGGAACCCGGGGGCTGGCTTCTTTTC
CCATCCGCATGGGTCTGCACATCGCCTTGCCCATTTTCGAAACCCCAGTT
GCCTGCCGGGCCGGAAAAATTTCACTGGGAAGGGTTCCCAGGGACTTGGC
CCCCCTATTCGAAGCGTATGACTCCATATGGGGTCAGGGACGGCCATTGG
CGTGCTCAGC
FMO07740.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp26F-RA | 2418 | CG31634-RA | 89..1154 | 8..1060 | 4210 | 94.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6628746..6629070 | 566..242 | 1625 | 100 | Minus |
| 2L | 23513712 | 2L | 6632082..6632319 | 245..8 | 1190 | 100 | Minus |
| 2L | 23513712 | 2L | 6628518..6628691 | 739..566 | 730 | 97.1 | Minus |
| 2L | 23513712 | 2L | 6627516..6627604 | 829..741 | 290 | 93.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:15:38 has no hits.
FMO07740.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:16:50 Download gff for
FMO07740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp26F-RA | 86..1042 | 8..957 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:49 Download gff for
FMO07740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp26F-RA | 89..1045 | 8..957 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:02 Download gff for
FMO07740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp26F-RA | 89..1045 | 8..957 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:02 Download gff for
FMO07740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6628516..6628690 | 567..741 | 96 | <- | Minus |
| 2L | 6628746..6629068 | 244..566 | 100 | <- | Minus |
| 2L | 6632084..6632319 | 8..243 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:49 Download gff for
FMO07740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6628516..6628690 | 567..741 | 96 | <- | Minus |
| arm_2L | 6628746..6629068 | 244..566 | 100 | <- | Minus |
| arm_2L | 6632084..6632319 | 8..243 | 100 | | Minus |
