FMO07741.5prime Sequence
1158 bp (1023 high quality bases) assembled on 2008-11-06
> FMO07741.5prime
CAGTCGACATGGAGACTTGTGAAGTGGAGGGAGAGGCGGAGACGCTGGTG
AGACGCTTCTCCGTCAGCTGCGAGCAATTGGAGCTGGAAGCGAGAATTCA
GCAAAGCGCTCTGTCCACCTACCATCGCTTGGATGCGGTCAACGGGCTGT
CCACCAGCGAGGCAGATGCCCAGGAGTGGCTGTGTTGCGCCGTCTACAGC
GAACTGCAGCGCTCGAAGATGCGCGATATTAGGGAGTCCATCAACGAGGC
AAACGATTCGGTGGCCAAGAACTGCTGCTGGAACGTGTCACTAACCCGTC
TGCTGCGCAGCTTTAAGATGAACGTGTCCCAGTTTCTACGCCGCATGGAG
CACTGGAATTGGCTGACCCAAAACGAGAACACTTTCCAGCTGGAGGTTGA
GGAACTGCGTTGTCGACTTGGTATTACTTCGACGCTGCTGCGGCATTATA
AGCACATCTTTCGGAGCCTGTTCGTTCACCCCGGCAAGGGTGCGGACCCG
GGTGCCGCGAATCACTACCAAGCGCTGTATGAGTTCGGTTGGTTGCTCTT
CCTGGTCATTCGCAACGAGTTACCCGGTTTTGCGATTACAAACCTGATCA
ACGGCTGTCAGGTGCTCGTTTGCACAATGGATCTCCTTTTCGTGAACGCC
TTAGAGGTGCCCCGATCCGTAGTTATCCGCCGGGAGTTCTCTGGAGTGCC
CAAGAATTGGGACACCGAAGACTTCAATCCTATTTTGCTAAATAAATATA
GCGTGCTAGAAGCACTGGGAGAACTGATTCCCGAGCTACCAGCGAAGGGA
GTGGTGCAAATGAAAAACGCCTTTTTCCACAAAGCCTTAATAATGCTCTA
TATGGACCATAGTCTAGTTGGAGACGACCCCCATATGCGGGAAGATCATT
AGGAGGGTATGCTAGATATCAATCTGGAAAACTTTAATCGCAATACACCA
GTCAAGTACCCGACATTAGTGAGAATGGACGAGCGTGTGCTGCTCAGCGT
CCAGGGGCGATAGAACCAAGGGGACCTTCTAAAAGCCCCAGGCTCGCCTT
CCAAACAGCTCGTCACTTCCCTAAGAAGCCGTCCACCCATGATCTACCCA
GAAGTCTTTCCCCTATGCATATAAAAGCATTCCCCAGAAAGGAGACCGCG
ATAATTGT
FMO07741.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rbf2-RA | 2693 | CG5083-RA | 161..1302 | 9..1143 | 5130 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15965606..15966747 | 9..1143 | 4820 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:55:45 has no hits.
FMO07741.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:16:49 Download gff for
FMO07741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rbf2-RA | 156..1309 | 9..1154 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:29 Download gff for
FMO07741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rbf2-RA | 156..1309 | 9..1154 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:34:42 Download gff for
FMO07741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rbf2-RA | 161..1314 | 9..1154 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:34:42 Download gff for
FMO07741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15965606..15966759 | 9..1154 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:29 Download gff for
FMO07741.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11791328..11792481 | 9..1154 | 97 | | Plus |
