FMO07747.5prime Sequence
455 bp (-60 high quality bases) assembled on 2008-11-06
> FMO07747.5prime
AGGATGCGCAAATCATTCTTGCAGGCGGTAAAGAAGATTACAAGGAGTTC
ATCCGGACTTTTAACGTGGAGAACTTTTTCTACAAATACCGTGACACCCT
GAAGAGGAACTATCTTAATGGTCGCTACTTCTTGGAGATTGAGATGGAGG
ATTTGGTGGGCTTCGATGAGACCTTGGCTGACAAGCTGAACTAGCAGCCG
ACGGAGCATTTGGAAATCTTCGAGGAGGCTGCCCGGGAGGTAGCCGACGA
GATCACAGCTCCCCGGCCGGAGCACGAGGAACATATGTACGACATCCAGA
TTTTTCTGAGCTCCAATGCGAATCCCTCCAACATACGACAGTTGAAGTCT
GACTGCGTATCCAAGCTGGTTAAGATCGCCGGATTCTTTGTCGCAGCCTC
AGGAATAAGTGCTATGGCTACGCGGATGTTTATCCTTTGCCTGTCCTGCA
GCACG
FMO07747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcm5-RA | 2452 | CG4082-RA | 203..657 | 1..455 | 1990 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10788870..10789234 | 91..455 | 1645 | 96.7 | Plus |
| 3R | 32079331 | 3R | 10788726..10788816 | 1..91 | 300 | 93.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:22 has no hits.
FMO07747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:16:55 Download gff for
FMO07747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm5-RA | 199..653 | 1..455 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:02 Download gff for
FMO07747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm5-RA | 203..657 | 1..455 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:06 Download gff for
FMO07747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm5-RA | 203..657 | 1..455 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:06 Download gff for
FMO07747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10788726..10788816 | 1..91 | 93 | -> | Plus |
| 3R | 10788871..10789234 | 92..455 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:02 Download gff for
FMO07747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6614448..6614538 | 1..91 | 93 | -> | Plus |
| arm_3R | 6614593..6614956 | 92..455 | 96 | | Plus |
