FMO07751.5prime Sequence
806 bp (806 high quality bases) assembled on 2008-11-06
> FMO07751.5prime
CAGTCGACATGAAGGTGTTCCTAACTATTCTGGCTTTGGCCGTGGCCTCC
GCCTCGGCGTACGAGAGCGTCGTGCACCCCAAGGATCTGTCCAAGGTGGC
CAAGATCGAGGGTCGCATCACCAACGGCTATCCGGCTGAGGAGGGCAAGG
CTCCCTACACCGTCGGTCTGGGTTTCAGCGGCGGCTGGTGGTGCGGTGGC
TCCATCATCTCCAACGAGTGGGTCCTCACCGCCGAGCACTGCATCGGAGG
TGATGCAGTGACTGTCTACTTCGGAGCAACCTGGCGCACCAACGCCCAGT
TCACCCACTGGGTTGGAAGCGGCAACTTCATCACCCACGGATCTGCTGAC
ATCGCCCTCATCCGCATTCCCCACGTGGACTTCTGGCACATGGTGAACAA
GGTGGAGCTGCCCAGCTACAACGATCGCTACAACGACTACAACGAATGGT
GGGCTGTTGCCTGCGGCTGGGGAGGCACCTATGACGGCAGCCCACTGCCC
GACTACCTGCATTGTGTCGATCTCCAGATCATCCACAACTCCGAGTGCGC
CAGCTACTACGGAACCGGCACCGTCGGCGACAACATCATCTGCGTGCGCG
TGGTCGATGGCAAGGGCACCTGCGGTGGCGACTCCGGAGGTCCTCTGGTC
ACCCATGACTGCAGCAAGCTTGTGGGAGTCACCAACTGGGTGTCGGGAGC
CGGATGCCAAGCTGGCCACCCCGCTGGCTTCCAGCGTGTGACCTACCACT
TGGACTGGATCCGTGACCACACCGGCATTGCTTACTACGCAAGCTTTCTA
AACCAT
FMO07751.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jon66Ci-RA | 838 | CG7118-RA | 17..798 | 7..788 | 3835 | 99.4 | Plus |
| Jon66Cii-RA | 830 | CG7170-RA | 113..789 | 109..788 | 2140 | 88 | Plus |
| Jon25Biii-RA | 827 | CG8871-RA | 19..795 | 8..787 | 1550 | 80.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8391556..8392337 | 7..788 | 3835 | 99.4 | Plus |
| 3L | 28110227 | 3L | 8392861..8393537 | 788..109 | 2085 | 87.7 | Minus |
| 2L | 23513712 | 2L | 4949973..4950749 | 787..8 | 1475 | 79.8 | Minus |
| 3R | 32079331 | 3R | 30487347..30487531 | 532..348 | 490 | 84.3 | Minus |
| 2L | 23513712 | 2L | 4954791..4955054 | 332..78 | 395 | 78.4 | Minus |
| 3L | 28110227 | 3L | 6053938..6054152 | 472..258 | 385 | 78.6 | Minus |
| 2L | 23513712 | 2L | 4954632..4954757 | 473..348 | 375 | 86.5 | Minus |
| 3L | 28110227 | 3L | 6052751..6052857 | 348..454 | 295 | 85 | Plus |
| 2L | 23513712 | 2L | 4952922..4953001 | 183..104 | 235 | 86.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:41:19 has no hits.
FMO07751.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:10:06 Download gff for
FMO07751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon66Ci-RA | 10..801 | 1..794 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:51:45 Download gff for
FMO07751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon66Ci-RA | 12..803 | 1..794 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:56 Download gff for
FMO07751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jon66Ci-RA | 12..803 | 1..794 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:56 Download gff for
FMO07751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8391551..8392342 | 1..794 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:51:45 Download gff for
FMO07751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8384651..8385442 | 1..794 | 98 | | Plus |
