FMO07753.5prime Sequence
1185 bp (935 high quality bases) assembled on 2008-11-06
> FMO07753.5prime
CAGTCGACATGAGGGGCATGATAATTGTGCCCATGGACCTGGAACCCGGC
TTCCGCAAAGCAGACATACACAATATACCCGCTTTGAACAGCGGAATGGT
GTACAATTTTTGTCTATCCGGCGCATCTGAGAAATCAAAACAAATACCAA
CGAATAGATGTGATCTCCTCACGGATTACGTCCAGGTGCGCAGACATGGC
GACGTGTGCGAACTCAAGGGACTCGTGTTTTCTGCCACCGACTTCGCCAA
CACGGTAACTCACGCCAATGTATCGCTTAAGATCGTCGAAAGTGCTCAGA
TGATCATGGACGGTCAATGCAGCCTGTGCACTGCAGCATGTACTTGTGCC
CACATCGTGGCCTTCACCTTCTGGCTGCTAAACAAGAGCACAGATCGAAA
TCCCTCGGCTGTGGTGGAGTTTTGGGGCCACGAGTTGGAAAATCTGGTGC
AACCGGAGCCCACAACTGCTACTCGAATATGTGATATAATTCCCAAGGAT
GATGTGCGAATGGAAAGCGAACTAAACTCGAAAGAACTTAGCGCCAGCGA
GGGAGAGGCTTTCCTAGTGACCATTCTGAATGAACTGGCCGACTGTGGCA
GGGACTCTGCGCTCTACCGGCAATGTGTGGAGACCACCGATGAGTTCGAG
CCCATGTTCGTACACCATGTGCTGCTCCGAGCAAATGAGTACAATGTCGT
CGATCCGTCCAGCTATGTGCAACACATGGAGGCACAGGCACATACGGGTA
TTATCGAAAGTCTGTACGAGGCAACGCGAAACAAATACAAATCCCGATTG
TGGGTGGAGGTACAGTATATGCGCATCCGTTGCTCATGATGCACATGATC
ATAACCGCAAAACCTCTGATGATGACGATCAAATCTTCAATATGATGTTT
TGCAAAGGACGTGACAGATTACGAGGATCGTGGTGCAGCAGAGGAGCACA
GCGCTTCAATTGAAACAGACTGAGAGCTGGAGAACAGAACTACTAAAATG
CGGTCGGATCCGGGCCGAAAACTCCCCTTCTTGGCGCCGCCCCTGGATGG
GATTCCGGAACGATACTTTGGTCGAAACTAATATCCAAAGAATTGACAAG
AATTCGAGAAGATACTTTCGAGGCAGCCGATCTATATTGACCCAAGTTAT
TGGCCATAAACAATCCAAAATGATTTGTCGCGGAT
FMO07753.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8366-RA | 1472 | CG8366-RA | 79..1225 | 9..1147 | 4785 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15955574..15956270 | 340..1027 | 2795 | 96.7 | Plus |
| 2R | 25286936 | 2R | 15955323..15955518 | 146..341 | 980 | 100 | Plus |
| 2R | 25286936 | 2R | 15955118..15955254 | 9..145 | 685 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:58 has no hits.
FMO07753.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:10:04 Download gff for
FMO07753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8366-RA | 77..1141 | 9..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:17 Download gff for
FMO07753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8366-RA | 79..1143 | 9..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:49 Download gff for
FMO07753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8366-RA | 79..1143 | 9..1064 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:49 Download gff for
FMO07753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15955118..15955254 | 9..145 | 100 | -> | Plus |
| 2R | 15955323..15955516 | 146..339 | 100 | -> | Plus |
| 2R | 15955574..15956215 | 340..975 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:17 Download gff for
FMO07753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11842623..11842759 | 9..145 | 100 | -> | Plus |
| arm_2R | 11842828..11843021 | 146..339 | 100 | -> | Plus |
| arm_2R | 11843079..11843720 | 340..975 | 98 | == | Plus |
