FMO07759.5prime Sequence
680 bp (-85 high quality bases) assembled on 2008-11-06
> FMO07759.5prime
CAGTCGACATGCAGCAGCTGATCAGAGTGGCGCGGACGTTGGGTCAACGC
TCGAGCGGCGCATGGAGTGCGAGGATAATCGCTGGTGGAAACCGGGGAAT
CGCATGCCTGGCCGCCCTCTCCGAGACCCATCAGATTCTCCAGAAGACTT
GCCGGGAGTTCGCCAATGCGGAACTGGCCCCCAAAGCGCGACACCACGAC
CGGGAGGAGCTTTATCCGGCGGAACAGGTCCGACGGTTGGGAGAACTCGG
TCTCATGTCAGTGACGGTTCGAGAGGAGTATGGTGGTTCCGGATTGGATT
ACCAAGCCTACGCGATTGGCATGGAGGAGGTGGCTCGTGGTGACACCGCC
GTGTCCTTTGTGATGGGCGTGAATAACCTGTACCTGGGTGCAATGCAACA
GCATGGAACCGAGCAGCAGAAGCAGGATTTCCTGGTGCCGTACACCCAGG
GTGAGCACATCGCCTTCTATGCACTATCGGAACCTGGAAACTGATCGGAT
GCATGAGCTGCCACCACTACGGCCAAGCTGCAAGGGGACAACTACCAAAT
AAACGGCACTAAAGCGTGAATATCAAACTCCAAAGATGTCTGCGGGGGTA
TCGTCTTTGCCACGGTGGACAAGAGCATGAAACACAAAGGAATCACTGCC
TTTCTTACGCCCAAGTATGTTCCAGGACTC
FMO07759.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4860-RA | 1393 | CG4860-RA | 15..686 | 9..680 | 3090 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12220588..12220986 | 680..282 | 1740 | 95.7 | Minus |
| 3R | 32079331 | 3R | 12221113..12221356 | 285..42 | 1205 | 99.6 | Minus |
| 3R | 32079331 | 3R | 12221415..12221450 | 44..9 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:04:15 has no hits.
FMO07759.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:10:12 Download gff for
FMO07759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4860-RA | 7..685 | 1..680 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:58 Download gff for
FMO07759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4860-RA | 8..686 | 1..680 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:03 Download gff for
FMO07759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4860-RA | 8..686 | 1..680 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:03 Download gff for
FMO07759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12220588..12220985 | 283..680 | 95 | <- | Minus |
| 3R | 12221116..12221355 | 43..282 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:58 Download gff for
FMO07759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8046310..8046707 | 283..680 | 95 | <- | Minus |
| arm_3R | 8046838..8047077 | 43..282 | 99 | <- | Minus |
