FMO07773.5prime Sequence
1117 bp (928 high quality bases) assembled on 2008-11-06
> FMO07773.5prime
CAGTCGACATGAATTTCGAAAGTCATCTGATTGTTTGCATTAGTTTGCTT
CTTCAATTACGGATGGGAGCAACTATGCCTATGGAACGGCCACTCCCCCC
CTCTGTGTATGCACAGGCTAGGCATTGGAACGTGCTTGAAACAGTCGTAA
ATAATATGCGGATCACTAAAAGGCCGTGGATAGTTACAAAAACTAAACCG
TGCGGTGAGGTGATTAGGGAAACCTACATGTTGAGCCCCAACGAAGAGGA
ACTCATAAGGAGAACGGAAGTCATGCTCTTGCAAGCTCAAGGAAAATTGG
AATGTTTACTTAGCCAGTTTCAACCGACATTACGACTTGGCAGTGTCTAC
AATAATCCCTTTCTAAACCCGGTCGGTTTTGGTTTTCCTGACTATAACGT
CTTCCAAAATTTTCCGTTTATCCCGGAATTTAAGCCGCAACGTATTCCTC
CCGAAGAAGATCGCAGTAATGAAAATAATCCTCGCCGAGAAGATCCGCGG
GTAAATGAGCAGGATGCGTGGAATTTACGCCCTCAAGACGTCCCCAAAGA
AAATGAACACATTCCCAATAGTGAATCGGATAGTGATAGATGGCTGCCAA
ATCCAACATCCACACACCGGCCTATCGTAACTTTGCCTACCCTGGCACCC
CCAAACTTGAAGGATACGGAGCCCATATGGGTTTCCAGTCCCAGAACCAA
CATCAACCGAGCGAAGTTCGGTCCCGCTGCCCACGCTCGCACCCAAAGGC
GACGGAACTGACTCGACAATCGATGACTTTTTGGCAAAGGTGGATCTCAC
TGTCGCGGACATCAAAGAGGAGGATGGCCAGGTGGTCACCACAATCGTGA
ACAAACAAGGACGCGTTCTAATGCCAGTTTTGCACTGAGCAATGATACGA
ACAATGGGGTGCGGCAAACTATCAAAGTCGTCATTGGAAAGCTAGCTTTC
TAGACCATTCCGTTTGGCGCGGCGGGCCCAGGTAAGTGTCATAATCTAAT
CTTATCATTATCTTATCACACTAGCCTAGGTGATCCTGTGTATGACTAGT
GCTGAATTCCACAATAAAAAGGCCGGAGGCACCGAACGTTCGTACCAATC
CTAATGGATTTCTGAGT
FMO07773.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31769-RA | 1086 | CG31769-RA | 55..986 | 9..940 | 4510 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14109706..14110575 | 930..62 | 4160 | 99.3 | Minus |
| 2L | 23513712 | 2L | 14110632..14110685 | 62..9 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:42:56 has no hits.
FMO07773.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:49 Download gff for
FMO07773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31769-RA | 49..986 | 1..940 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:35 Download gff for
FMO07773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31769-RA | 49..986 | 1..940 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:39 Download gff for
FMO07773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31769-RA | 49..986 | 1..940 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:39 Download gff for
FMO07773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14109692..14110574 | 63..947 | 98 | <- | Minus |
| 2L | 14110632..14110691 | 1..62 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:35 Download gff for
FMO07773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14109692..14110574 | 63..947 | 98 | <- | Minus |
| arm_2L | 14110632..14110691 | 1..62 | 93 | | Minus |
