FMO07774.5prime Sequence
1170 bp (1021 high quality bases) assembled on 2008-11-06
> FMO07774.5prime
CAGTCGACATGGATGAAAATAGCTTAATCTACGGACTCGAACTGCAGGCG
CGGGCTTTAACACCTCAGTACGGAGAGAGCAACGATGTGTGCTTCTTCAT
AGCCACCAACTCCTTGAAGCCCACCAATCAGGTTCACTTAATCCAGTACG
AGGAGGAGCAGGGATCCGTGCAATCAAAGGTCTTTGAGCACGCCCTGGGT
GAAGTTTGGAAACTAAATAGTTGTCCGCGTAATCCTCGCCTGCTGGCCTC
CGTCTACAATGTACAAAAGGGAGCACAAGTGCTGACCAAAGCGGCTCTGT
TTACGCTGCCCGAGAATCTCAATCCCGATCCGGAGCAGCTGAAGTCAGAG
TACCTGCCGTGGGAGCAGGTTGAGGTCCTGGATACCGAAGCACTGGGCGA
ACGTGTGAAGACCATCGAATTCCATCCCAACCAGGACACACTCGCCTGTG
TGGTGGACAACAAGGTGGCTGTGATGCAGCGGGCCGAGTCCTCTACTCGC
GTGGTGGCCGAGGTGCCGGCCAGTGGTTCATCCAGTGGATCTGCAAAGCA
CACACAGCATTTCACCAGCGGCAAGTGGTCGCATCATCATCAGGGCCACC
AGTTTCTCACCCTCCAGGATGGCAATCTAAGTGCCTACGATGTGCGGGAT
ACACAGCATTGTGCCTGGAGCATCAACGATGCGCATGGTCAAATGGTCCG
TGACCTGGACTGCAATCCCAACAAGCAGTGCCATTTGGTCACCGGCGGTG
ACGATGGCTACTTGAGGATCTGGGACTGTCGCATGCCCAAGGCTCCCGTT
TTCGAGCGCTCCGATCATTCGCATTGGGTCTGGTGCGTTCCGCTTCAACA
CATTCCACGACCAACTGATCCTCTCCAGCTCCCAGTGACTGCAAGGTGCT
GCTCACGTGTTGCGGGATCGGTTTAGTTCGGAGACGCAGGTTCAGGCTGG
ACTAGATGAGTCCAACTTCAGTTGGTGCCGATGCCGAGGAAAAGGCACAA
CTCTGGCAGAATGGTCTGCTGCAAACTTCGATCAGCACGAGGACCCGTTT
ACTGGCGGAGTGAGCAATGGTGATCCTGTGATCTTTGCCTTCCCTAGCTA
CGAATGTCGGTCTTATCTTCCAAAGGTGGCAAGCCGTACAGTACCAGAAT
TATTGGCAAGCTCAGACCAT
FMO07774.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10646-RA | 1377 | CG10646-RA | 68..1208 | 9..1148 | 5030 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12502698..12503607 | 1088..178 | 3885 | 97.3 | Minus |
| 3L | 28110227 | 3L | 12503655..12503827 | 181..9 | 865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:56:25 has no hits.
FMO07774.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:47 Download gff for
FMO07774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10646-RA | 75..1176 | 1..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:01 Download gff for
FMO07774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10646-RA | 60..1161 | 1..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:10 Download gff for
FMO07774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10646-RA | 60..1161 | 1..1103 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:10 Download gff for
FMO07774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12502683..12503605 | 180..1103 | 97 | <- | Minus |
| 3L | 12503657..12503835 | 1..179 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:01 Download gff for
FMO07774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12496757..12496935 | 1..179 | 97 | | Minus |
| arm_3L | 12495783..12496705 | 180..1103 | 97 | <- | Minus |
