FMO07778.5prime Sequence
1135 bp (992 high quality bases) assembled on 2008-11-06
> FMO07778.5prime
CAGTCGACATGGATACGACAGAAAAGGCTCTCAAGGAGGTGACCCCGGCG
ATGCTTAGCCTGAACAATTGCCCGGGCACAACGCCCGGCACGCCGATGAG
CAAAAATCAGCTTAAGAAGCAGCGAAAGCTGGCGGAGTTTGCCGAACTCC
GGAAGCTGCGACGCGAACGGGAGCGTGAGAAGAAAAAGCAGAAGCGGCGG
GAGGCCAAGGAGCTGGGTCTGCCCGTCCGGACGGGACCCTCCCGCAAGGA
GCTGAAGAAACGCCAGTTGGCAGACGGCGGAAAGTCTGGCCTCTCGGTCG
CTATAGATCTGGACTACGACGATCTGATGCAGGAACGGGACATCGTCAAG
TGCGTGAAGCAGTGCCTTCGCATCTACACCATTAATCGGCGCAGCCCACA
GCCGGGCAATCTGCACTTCACAGGCATCCGGCGCAACGGTCACATCCACG
AGTCATTCAAGAAGAACGAAGGCTGGGAGAACTGGCACGTGCAGTACTAC
TTCGATCGCGGGCACACCGATATTTTCGAGCATAGCCAACTGGTCTACCT
CACCTGCGAGTCGGATCGGGTGTTGGACAAGCTGCAGCCCGGCTGCACCT
ACGTCATCGGTGGCCTGGTGGACCACAATCACTTCAAGGGCCTGTGCCAC
TCGAGGGCCACGTCGGCGGGGCTGACTACCGCTCGCCTCCCGCTTAGCGA
GCATGTAGACATGAAGACGAGGGCCGTGCTGAGCACCTACCATGTGTTTG
AGCTGCTGACCAAAGTTGCTGCCGGTCAGGACTGGACTACGGCCATTCTG
GAAACTATTCCCATGCGCAAGGGAGCCAATGCGAAAATCACAGACAAAAG
GAGCCGATCATTGCTTGCAGCAGCAGGATGAAAACAGAAACAGGAAGCTG
AGTCAGATGAGCCCACCTTAACCGCCGTCGAGTCTGAAATCGAATCCCAT
TCTTTAGACAGTGCAAGCTTTCTAGACATTCGTTTGCGCGCGGGCCAGTA
AGTGTCATAATCATATCATATCATATCTATTCACACTAGCCTAGGAGATC
TGATCATGACTATGCTGATTCTCACCAATAAAAAAGCGCCGGCGCACGAA
CGTTCTGACCATCGAATGGAGTCTGAGCTTTACTG
FMO07778.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14618-RA | 1210 | CG14618-RA | 113..1069 | 9..962 | 4665 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22473810..22474545 | 9..744 | 3680 | 100 | Plus |
| X | 23542271 | X | 22474636..22474857 | 744..962 | 915 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:33 has no hits.
FMO07778.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:42 Download gff for
FMO07778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14618-RA | 73..1037 | 1..962 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:08 Download gff for
FMO07778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14618-RA | 105..1069 | 1..962 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:11 Download gff for
FMO07778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14618-RA | 105..1069 | 1..962 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:11 Download gff for
FMO07778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22473802..22474545 | 1..744 | 99 | -> | Plus |
| X | 22474637..22474855 | 745..960 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:08 Download gff for
FMO07778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21875638..21876381 | 1..744 | 99 | -> | Plus |
| arm_X | 21876473..21876691 | 745..960 | 97 | -> | Plus |
