FMO07779.5prime Sequence
377 bp (377 high quality bases) assembled on 2008-11-06
> FMO07779.5prime
CAGTCGACATGAAGTGCCTGATTCTGTCCTTTGCAATTTTCGTTGTCCTG
GCTTCCCAGGCTACGGCCGGAAATGTGATTATCGGCGGAGTATGCCAGGA
TTGCAGTCCGCCGGTGGCGGAAAACGTCGTAGTCGGTGGCCAATCCTACA
GGACGGGTAGGCCGGGCCAGGGAACGGTGTATATCAATTCCCCTGGCGCA
TATCTAGGAGCTCTCGATGGTCCCATTCGGCGAACTGGCGCTGGCGGCGG
AGGAGGCGGTGGCGCCCAGTATCCGGATGGTTACAGTGGTCGTCTGCCAG
GTGGCACTTACCTTCACAATAAGGATTGCGTGGGCTGCAGCATCAGCGGG
GGCGGGGATGCAAGCTTTCTAGACCAT
FMO07779.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IM23-RA | 468 | CG15066-RA | 33..383 | 9..359 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18382789..18383082 | 359..66 | 1470 | 100 | Minus |
| 2R | 25286936 | 2R | 18383146..18383203 | 66..9 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:49:20 has no hits.
FMO07779.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:41 Download gff for
FMO07779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM23-RA | 20..383 | 1..363 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:01 Download gff for
FMO07779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM23-RA | 23..386 | 1..363 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:00 Download gff for
FMO07779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM23-RA | 23..386 | 1..363 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:00 Download gff for
FMO07779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18382786..18383081 | 67..363 | 99 | <- | Minus |
| 2R | 18383146..18383213 | 1..66 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:01 Download gff for
FMO07779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14270291..14270586 | 67..363 | 99 | <- | Minus |
| arm_2R | 14270651..14270718 | 1..66 | 94 | | Minus |
