FMO07780.5prime Sequence
509 bp (509 high quality bases) assembled on 2008-11-06
> FMO07780.5prime
CAGTCGACATGAAACTTTTCATCGCGCTCTCTGTTCTGGTGGCTGTGGCA
TCGGCCCTGCCTCAATTCGGCGGAAACGCCAACGCCAACGCGAATGCTAA
TGCCAATGCCCAGGGCGGCCTTGGAGGTCGTCCTGGATTCGGCGGTGGCC
CAGGGTTTGGCGGTGGCCCAGGTTTCGGCGGTGGCCCAGGTTTCGGCGGT
CGCCCAGGCTTTGGCGGTGGCCCAGGATTCGGCGGTGGCCCAGGTTTCGG
CGGTGGCCAAGGTTTCGGCGGTCGCCCAGGATTCGGCGGTGGCCCAGGAT
TCGGCGGTGGATTTGGTGGAGGTCCTGGATTTGGTGGTGGCTCAGGATTC
GGTGGTGGACGTCCTGCAGTCGGTGGCTCATCTGCGGCCTCAGCCTCTTC
CTCGGCATCGGCTAGTGGTGGCGGACGTGGTGGCGCTGGATCCGCTTCTG
CATCGTCATCCGCCAATGCCTCCGGAGGTGGACTGTACGGTGCAAGCTTT
CTAGACCAT
FMO07780.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7296-RB | 943 | CG7296-RB | 118..602 | 7..491 | 2425 | 100 | Plus |
| CG7296-RA | 599 | CG7296-RA | 41..525 | 7..491 | 2425 | 100 | Plus |
| CG7296-RB | 943 | CG7296-RB | 249..422 | 192..359 | 480 | 86.2 | Plus |
| CG7296-RB | 943 | CG7296-RB | 303..470 | 138..311 | 480 | 86.2 | Plus |
| CG7296-RA | 599 | CG7296-RA | 172..345 | 192..359 | 480 | 86.2 | Plus |
| CG7296-RA | 599 | CG7296-RA | 226..393 | 138..311 | 480 | 86.2 | Plus |
| CG7296-RB | 943 | CG7296-RB | 268..419 | 121..272 | 460 | 86.8 | Plus |
| CG7296-RB | 943 | CG7296-RB | 232..383 | 157..308 | 460 | 86.8 | Plus |
| CG7296-RA | 599 | CG7296-RA | 155..306 | 157..308 | 460 | 86.8 | Plus |
| CG7296-RA | 599 | CG7296-RA | 191..342 | 121..272 | 460 | 86.8 | Plus |
| CG7296-RB | 943 | CG7296-RB | 237..349 | 198..310 | 430 | 92 | Plus |
| CG7296-RB | 943 | CG7296-RB | 309..421 | 126..238 | 430 | 92 | Plus |
| CG7296-RA | 599 | CG7296-RA | 160..272 | 198..310 | 430 | 92 | Plus |
| CG7296-RA | 599 | CG7296-RA | 232..344 | 126..238 | 430 | 92 | Plus |
| CG7296-RB | 943 | CG7296-RB | 228..331 | 207..310 | 325 | 87.5 | Plus |
| CG7296-RB | 943 | CG7296-RB | 318..421 | 117..220 | 325 | 87.5 | Plus |
| CG7296-RA | 599 | CG7296-RA | 151..254 | 207..310 | 325 | 87.5 | Plus |
| CG7296-RA | 599 | CG7296-RA | 241..344 | 117..220 | 325 | 87.5 | Plus |
| CG7296-RB | 943 | CG7296-RB | 249..367 | 246..358 | 255 | 81.5 | Plus |
| CG7296-RB | 943 | CG7296-RB | 357..469 | 138..256 | 255 | 81.5 | Plus |
| CG7296-RA | 599 | CG7296-RA | 280..392 | 138..256 | 255 | 81.5 | Plus |
| CG7296-RA | 599 | CG7296-RA | 172..290 | 246..358 | 255 | 81.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10686465..10686949 | 491..7 | 2425 | 100 | Minus |
| 2L | 23513712 | 2L | 10686646..10686764 | 256..138 | 460 | 92.4 | Minus |
| 2L | 23513712 | 2L | 10686648..10686799 | 272..121 | 460 | 86.8 | Minus |
| 2L | 23513712 | 2L | 10686684..10686835 | 308..157 | 460 | 86.8 | Minus |
| 2L | 23513712 | 2L | 10686700..10686818 | 310..192 | 460 | 92.4 | Minus |
| 2L | 23513712 | 2L | 10686646..10686758 | 238..126 | 430 | 92 | Minus |
| 2L | 23513712 | 2L | 10686718..10686830 | 310..198 | 430 | 92 | Minus |
| 2L | 23513712 | 2L | 10686646..10686749 | 220..117 | 325 | 87.5 | Minus |
| 2L | 23513712 | 2L | 10686736..10686839 | 310..207 | 325 | 87.5 | Minus |
| 2L | 23513712 | 2L | 10686598..10686710 | 256..138 | 230 | 81.5 | Minus |
| 2L | 23513712 | 2L | 10686700..10686818 | 358..246 | 230 | 81.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:41:30 has no hits.
FMO07780.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:39 Download gff for
FMO07780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7296-RA | 33..524 | 1..491 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:14 Download gff for
FMO07780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7296-RA | 34..525 | 1..491 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:52 Download gff for
FMO07780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7296-RA | 34..525 | 1..491 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:52 Download gff for
FMO07780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10686465..10686953 | 1..491 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:14 Download gff for
FMO07780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10686465..10686953 | 1..491 | 99 | | Minus |
