FMO07783.5prime Sequence
1129 bp (821 high quality bases) assembled on 2008-11-06
> FMO07783.5prime
CAGTCGACATGGGTTCCCTGGAGAAGCTGAAACAATTGAGACTGATACAC
CTGTGCATCGCGCTCACCTTCTTTACCAGCGGGCTGTGCATCAACTTTAT
CCAGCTGCTGATGCACGTCTTTATCAAGCCCATAGACAAGCGACTCTTCC
GCAAGTTGATGTACTATGCCTGCTATTCGCTTTACTCCCAACTTATCTTC
GTGTCCGATTGGTATGCCGGCAGCAAGATGACTGTCTACATGGACAAGGA
GGACTTCGAGAAGCATGCCGGCAAGGAACACGTCCTTCTGATCATGAACC
ATAAATACGAGATCGATTGGCTTAACGGCTGGATGATCTGCGAAAAGTTG
GGCGTGCTGGGCAACTGCAAGGCCTATGCGAAGAAGGCAATCCGCTACGT
GCCCATCATCGGCTGGGGCTGGTGGCTGGCCGAGTTCGTCTTCCTCAATC
GAAACTTCGACCAGGACAAGACCATCATCACCGAACAGCTCAAGGTGGTC
TTCTCCTATCCCGATCCCACCTGGCTTTTGCTCAACGCCGAGGGCACTCG
CTTCACTCCCGCCAAGCACGAGGCATCCGTAAAATTCGCCCAGGAGAGGG
GCATGACGGTGCTGAAGCACCATTTGATCCCGCGCACCAAGGGATTCACC
GCCAGCTTGGCACCCATCTGCGGTCTCTGTCCGGTAATCTACGACATTAA
TCTAGCGTACAGGCCCACAGATAAAGACCCCCGCCACAATGCTGAGTTTG
CTGCATGGAAAGAGCGTGGAACCGCACCTGCTGATGATGCGTATTCCACT
GGAACAGGTTTCCGGATGATGAGAAGGAGCCGGCCGCCTGGCTGCATAAA
CTGTTTCGTGGAGAAGGACAAGATCATCGATAGCTTCCTGGAAACGGGCA
GCTTCTTTTAGACGCCGGCATAAAGGAGGGTTCCGGGATATGTGATTAAC
GCCGGTGGTGCTCCTCCTGGAACTTTGTTGCTGGGGTGTATTCTCCTCTG
ACCGGCATTTCACATCGTGATCACATCCTAGGCTGGGGGGCATCTGGGAC
CGCCTTTTATCCCGTGCCTTCTTCCGTCCTGGGAACTTTTTTTATTGGGT
TCTATGGGGTCTAGGGCCATCCAACAAAA
FMO07783.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4729-RE | 1849 | CG4729-RE | 389..1466 | 9..1092 | 4550 | 95.6 | Plus |
| CG4729-RB | 1672 | CG4729-RB | 212..1289 | 9..1092 | 4550 | 95.6 | Plus |
| CG4729-RC | 1676 | CG4729-RC | 216..1293 | 9..1092 | 4550 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16383332..16383866 | 724..190 | 2645 | 99.6 | Minus |
| 3L | 28110227 | 3L | 16383927..16384107 | 189..9 | 905 | 100 | Minus |
| 3L | 28110227 | 3L | 16382471..16382741 | 995..725 | 800 | 91.2 | Minus |
| 3L | 28110227 | 3L | 16379722..16380156 | 703..269 | 525 | 74.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:41:03 has no hits.
FMO07783.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:52 Download gff for
FMO07783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4729-RB | 204..1294 | 1..1098 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:17 Download gff for
FMO07783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4729-RC | 209..1134 | 1..929 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:26 Download gff for
FMO07783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4729-RC | 209..1134 | 1..929 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:26 Download gff for
FMO07783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16382538..16382739 | 727..929 | 95 | <- | Minus |
| 3L | 16383331..16383866 | 190..726 | 99 | <- | Minus |
| 3L | 16383927..16384116 | 1..189 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:17 Download gff for
FMO07783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16375638..16375839 | 727..929 | 95 | <- | Minus |
| arm_3L | 16376431..16376966 | 190..726 | 99 | <- | Minus |
| arm_3L | 16377027..16377216 | 1..189 | 98 | | Minus |
