FMO07784.5prime Sequence
1142 bp (936 high quality bases) assembled on 2008-11-06
> FMO07784.5prime
CAGTCGACATGGGAACCGGCAGCAAGAACTACCAGGCTCCGGAATGGCTC
ACCGCCGAATTCCTGCAGGATGTGCTGAAGGAACACTTCAAGGAAGAGCA
GCTGGCAGTCACCGAGTTGATAGTAAAGAGCGCCCAAGTGGGCGACCAGG
CGGCGGGATTTGCCAGCGAAATGCATCGGGCCAGTTTCAATCTTCAGAGG
GGCACTGCACCCAAAGGCAAGTTTTCAGTGATTGTGAAGGATCATCCCAA
GGGACAAACAGGTGCTGTGGCCCACAGGAGTAAGCTCTTCAAGCGTGAGA
TTCTGGCTTACAAGGAGGTGCTTCCACGTATTCAAGCCTTGCTCCAATCC
ATTGGAGATCAAACGAAAATTGCACCTACGTGCTACTACACCACGGAATC
GCCGGAGCCATTCCTGATTCTGGAGGACATGCAGCTGTCCGGCTTCGAGA
ACTTCGAACGCGGTCGACTGCTGAATCTGGACTACGTACTGCCCACCATC
GAGAAGGTCGCCAAGCTGCACGCTTGCAGCGCCCTTATCGCCCAGGATAG
CCCCGAGGTGCTGGAGTTCTTCGACGAGGCGCCCATTTCGAGGAATCCGG
ACCGTCGTGACTTCCTCACCTTCTTCCCCGTCAACATTCGCTGCGTGGCC
GAGGAAGTGGCTCACTGGAAGGGCTACGAGGAGATCACCGAGAAGATGTT
CAACCTGGCCGAGAATGTCCTGCAAAGAGCGCTGACCATGTTTGAGAGCA
CAGGCAAGGATTTCCGGGTCTTCTACCTCACCGATCTGTGGATCAACAAT
CTCTTGTTCCACATCAACACGAGACCAAGGAGCCAGACGATGTGGTACAT
TGGACTTTCAGTTGGGCCTATGTGGGATCCCCAACCATTGATCTAATTAC
TTCCTCTACGGATCCTTGAACGAGAATGTTCGTAAGTTCCCTATAGTACA
TGTGGAGGGAATACCAGAGAGTGCTTCACAGACCCTGGAAAAGCTAAACT
ACCAGGGACACATTCCACTCTAAAGAATCCATTCGAGTTTGATCAGACTA
GTCTTATGGGTTGTCATTGGCGCCACTTGCTGGACTCACTGATCTTTCAG
GAGGGAGCTGGTTTCGAAACGTTGAGATCTGAACTCCATCCC
FMO07784.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31098-RA | 1487 | CG31098-RA | 108..1246 | 9..1136 | 5075 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25292032..25292870 | 846..9 | 4130 | 99.8 | Minus |
| 3R | 32079331 | 3R | 25291794..25291964 | 1017..850 | 535 | 94.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:34:58 has no hits.
FMO07784.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:50 Download gff for
FMO07784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31098-RA | 102..1240 | 9..1136 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:08 Download gff for
FMO07784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31098-RA | 108..1246 | 9..1136 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:12 Download gff for
FMO07784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31098-RA | 108..1246 | 9..1136 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:12 Download gff for
FMO07784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25291748..25291964 | 850..1059 | 92 | <- | Minus |
| 3R | 25292028..25292870 | 9..849 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:08 Download gff for
FMO07784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21117470..21117686 | 850..1059 | 92 | <- | Minus |
| arm_3R | 21117750..21118592 | 9..849 | 99 | | Minus |
