FMO07786.5prime Sequence
1128 bp (1033 high quality bases) assembled on 2008-11-06
> FMO07786.5prime
CAGTCGACATGGCCCACTACAAAGGTGCCGCCAGCGAGGCGGGCCGTGCA
GCCCAGCTGATGAAGAAGCGGGAGATCCAGCAGCAGGAGATCGAGTTTCG
CAAGAAGAAGATCGAGGAGGAGCTCAAGCTGGACAAGATTGAGAACAAGT
TTGCCACCCACTACGATGCCGTGGAGCAGCAGCTCAAGTCCTCGACCATT
GGTCTGGTCACCCTCGACGAGATGAAGGCCAAGCAGGAGGATATAGTGCG
GGAACGGGAGAAGAAGCTCGCCCAGAAGAAGGACGAAAAGGATCGGGAGA
AGCAGCGCGCCCTGGAGGCCATTCAGGCGGAGAAGAACAAGCAGAAGCGG
CAGATCCAGGCGCTGTCCTTCAACCTGGACGACGACGAGGAGGAGGAGGA
GGAGGACGACGAGGATCACGATAAGAAACAGCTGAAGATTAAGCAGGAGG
ATCAGCCCAAGCCCAAGTGGACGGAGATCAAGGAAGACATTTTGCCCATA
AAGAAGAAGAAGATATGCAAGAATCCTGACGTGGACACTTCCTTTCTGCC
AGATCGCGAGCGCGAGGAGCAGGAGAACAGACTGCGCGAGCAGCTGCGTC
AAGAATGGGTAATGCAGCAGGCGGAGCTGAAGGACGAGGACATCTCCATC
ACGTTCAGCTACTGGGATGGCTCCGGCCATCGGCGGAACGTGCTGATGAA
GAAGGGCAACTCCATCTACCAGTTTCTGCAGAAGTGCCTGGAGCTGCTGC
GCAAGGAGTTCATCGAACTGAAGACCGTAATGGCCGACCAGCTGATGTAC
GTCAAGGAGGATCTGATCCTGCCGCACCACTATTCCTTCTACGACTTTAT
CGTGACCAAGGCACGCGGCAAATCCGGGCCCGCTCTTCCAGTTCGACGTC
CACGACGATGTGCGCATGATAAGCGACGCCTCCGTGGAGAAGGAGGAGTC
CCATGCCGGAAAGGTACTCCTCCGCTCCTGGTACGAGCGAACAGGCACAT
CTTCCCAGCCAGCCGATGGGGAGCCTACGATCCCACAAGTCCTTACGACA
GTATCCATCAAGGACAGGATAAGAAGTAAAGGCAAGCTTTCTAGAACATT
CGTTGGGCGCGCGGGTCCAGTAAAGGCC
FMO07786.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12259-RA | 1246 | CG12259-RA | 96..1169 | 9..1080 | 5110 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27919967..27920994 | 1036..9 | 4985 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:10:37 has no hits.
FMO07786.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:34 Download gff for
FMO07786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12259-RA | 75..1154 | 2..1086 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:08 Download gff for
FMO07786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12259-RA | 93..1172 | 2..1086 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:24 Download gff for
FMO07786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12259-RA | 93..1172 | 2..1086 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:24 Download gff for
FMO07786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27919918..27920997 | 2..1086 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:08 Download gff for
FMO07786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23745640..23746719 | 2..1086 | 98 | | Minus |
