FMO07787.5prime Sequence
356 bp (356 high quality bases) assembled on 2008-11-06
> FMO07787.5prime
CAGTCGACATGGCAGATAAAAAGGTGGGTGGCAACAATGACGGTAAGGAG
AAGCGCCGCAAGGAGTCCATTCTGGACCTCTCCAAGTACTTGGAGAAACA
GATCCGCGTGAAATTCGCGGGCGGCCGCGAGGCATCCGGAATCCTCAAGG
GCTACGATGCGCTGCTCAATCTGGTGCTGGACAACACGGTGGAGTATCTG
CGCGACTCGGATGAGCCCTACAAACTGACCGAGGAGCAGACCCGCAGCCT
GGGACTGGTCGTCTGTCGCGGCACAGCCCTCGTCCTCATTTGTCCGCAAG
ACGGAGTCGAGAGCATCGCCAATCCGTTTATAACGCAAGCAAGCTTTCTA
GACCAT
FMO07787.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LSm7-RB | 466 | CG13277-RB | 41..370 | 9..338 | 1650 | 100 | Plus |
| LSm7-RC | 544 | CG13277-RC | 41..370 | 9..338 | 1650 | 100 | Plus |
| LSm7-RA | 705 | CG13277-RA | 41..370 | 9..338 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16742672..16742988 | 338..22 | 1585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:41:26 has no hits.
FMO07787.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:32 Download gff for
FMO07787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13277-RA | 23..359 | 1..338 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:12 Download gff for
FMO07787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LSm7-RA | 34..370 | 1..338 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:50 Download gff for
FMO07787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LSm7-RA | 34..370 | 1..338 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:50 Download gff for
FMO07787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16742672..16742986 | 24..338 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:12 Download gff for
FMO07787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16742672..16742986 | 24..338 | 100 | <- | Minus |
