FMO07789.5prime Sequence
1116 bp (991 high quality bases) assembled on 2008-11-06
> FMO07789.5prime
CAGTCGACATGGCTCAACGAACACATAGATATATATGTTTGGCGGGTTCC
ATGGTGCGAAACTTTCACACGGCGCGTTTTCCACGATGTGATAAAGTGGC
AATGTCAAATTTTGATACCGGAATTCCCTTGCCCTATAAGAAGTTGAGGG
AAAACCTGGATTGCATCAAGGGTCGACTGGGTGGACCGCTAACCTTGTCG
GAGAAGGTGTTATATTCCCATTTGGATCAACCGGATTCACAGGAAATCGA
ACGAGGCAAGTCCTATTTGCGATTGCGACCAGATCGCGTTGCCCTGCAGG
ATGCGACTGCCCAGATGACGCTACTGCAGTTCATTTCGTCGGGCCTGAAG
AAGGTAGCAGTTCCATCCACCGTCCACTGTGATCACTTAATTGAGGCCCA
GATCAGTGGCGATAAGGACTTGGCCAGGGCTAAGGATCTGAACAAGGAGG
TGTACGATTTTCTGTCCTCGGCGTGTGCCAAGTATAACTTGGGTTTCTGG
AAGCCTGGCAGCGGCATAATTCATCAGATCATTTTAGAGAACTATGCATT
TCCCGGACTACTGATGATCGGAACTGATTCCCATACTCCGAATGGCGGCG
GACTGGGTTTGCCTGTGCGTTGGAGTTGGTGGTGCAGATGCCGTCGATGT
GATGGCGAATATACCGTGGGAACTCAAGTGCCCGACCGTGATTGGATGCC
ATCTCACGGGTAAGATCAGTGGGTGGACTTCGCCCAAGGATGTCATCCTT
AAAGTGGCCGAGATTCTGACCGTTAAAGGAGGTACGGGTTGCCATTGTGG
AGTACCATGGTCCTGGTGTCGATCTATTTCCTGCACAGGCATGGCTACTA
TTACCAACATGGTGCTGAAATCGGTGCCACACTTCATATTCCATCCACGA
ACGCATGGTCACATATTGCGTGGCAACGGTAGAGGTGCCATCCCTGATGA
AGCCACAAGATAAGATCTTTTTGGTCCGGATGAAGGTTGCAATAACGATA
AGGTGATCGAGATCATTTGGACACTTGGAACCGCTGGTGAAATGGGCCCC
CTCACTCCCGATTTGTCCCTCCCATAATTAACTGGATCGACTCCCAAAAA
ATGGCTATCCCAGGAT
FMO07789.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4706-RA | 2566 | CG4706-RA | 76..1190 | 9..1110 | 4740 | 96.2 | Plus |
| Acon-RF | 3102 | CG9244-RF | 503..1095 | 282..874 | 955 | 78 | Plus |
| Acon-RE | 3022 | CG9244-RE | 422..1014 | 282..874 | 955 | 78 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11137252..11138320 | 9..1069 | 4365 | 96.2 | Plus |
| 2L | 23513712 | 2L | 21170458..21170964 | 282..789 | 855 | 78.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:15:49 has no hits.
FMO07789.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:30 Download gff for
FMO07789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 69..1162 | 1..1085 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:53 Download gff for
FMO07789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 69..1162 | 1..1085 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:08 Download gff for
FMO07789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4706-RA | 69..1162 | 1..1085 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:08 Download gff for
FMO07789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11137245..11138338 | 1..1085 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:53 Download gff for
FMO07789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6962967..6964060 | 1..1085 | 96 | | Plus |
