FMO07790.5prime Sequence
1118 bp (970 high quality bases) assembled on 2008-11-06
> FMO07790.5prime
CAGTCGACATGCTGAGCAGATTGGGCCGGAGTGGTCGGGCCGGTGTGCGC
ACCTTTGCCAATGACATTCGCTTTGGAGCCGAGGCGCGCTGCCTGCTTAT
GCAGGGCGTGAACGTCCTGGCCAACGCGGTGGCCACCACTCTGGGCCCGA
AGGGCAGGAACGTGCTCATCGAACAGCTGCTGATCTCGCCCCGGATCACC
AAGGATGGCATCACGGTGGCGAATAACGTGCAGCTGGGCAATCGTCGGCA
GGATATGGGAGTTCAATTGCTGCGCCAGGCCACCAATAATACCAATAATA
AGGTAGGCGATGGCACCACCACGGCCACTATTCTGGCCCGTGGAATAGCC
TGCCAGGGTATGCATGTGTTGCGCCAGAGCAAGGTGAACGTCCAACTCCT
GCGGGAGGGCATTCTCGAGGGATCGCGCGCTGTGTGCGATGCTCTAGGTG
AGATGTCCCAGTCGGTGGATACTATTGGCCAAGTGGAAGCAGTGGCCAAG
GTGGCACTGAATGGAGACGAACGGCTGGCGGAGCTGATTGGTGACATCAT
TTTGGAGCTGGGCGATAGCGGCGTCATCCTGCTGAAGGAATCCCACAGTC
CCTTCGATGAGGCTAAGATCCAGGAGGGTATAACCATCGCTTCGGGCTAC
TATTCGCCATTCTTTGCCAAGCAATCTCATACCCTGGAATTGGAGAATTG
CTTGCTGCTGCTCACTTTGGCTAAGATTGATCAAGTGGAACAGATACTTC
CCGCTCTCGAGCTGGCCAGACTAAAGAACGACCCCTTCTGATCATTGCCA
AAAATTTTGGTAGCGATTTGCTTAAGATCTTAGTGCTAAATAATCTGCAA
GGTCGAGTTCAGTCTGTGCTGTGAAGGCTCCAAGCTTTGGTAACGAGCAG
TGCGAGGAAAAGGATATATAGCTTTTGCCACCGGTGGCCATCTTCTGGAG
GATGCCTCCAGTCTGGCGGATCTCAGCGAGAGGATCTGGTGAGGTGATGG
AGGCGTGTGGACGCTAAGGAACGCACCTAATTGCCACCGATTCAATGTGA
ACGAAGAGCAGTGCCATGCCCCATCCAGGACATTCCTGACTGGATTCGAA
TGAGCTTCACGAAGTGGA
FMO07790.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp60D-RB | 1960 | CG16954-RB | 152..1239 | 9..1089 | 5025 | 98.1 | Plus |
| Hsp60D-RA | 1894 | CG16954-RA | 86..1173 | 9..1089 | 5025 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13448259..13449346 | 1089..9 | 4770 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:41:23 has no hits.
FMO07790.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-21 15:17:29 Download gff for
FMO07790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60D-RB | 142..1246 | 1..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:11 Download gff for
FMO07790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60D-RA | 82..1186 | 1..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:49 Download gff for
FMO07790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60D-RA | 82..1186 | 1..1104 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:49 Download gff for
FMO07790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13448246..13449350 | 1..1104 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:11 Download gff for
FMO07790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13448246..13449350 | 1..1104 | 97 | | Minus |
