FMO07801.5prime Sequence
1133 bp (1035 high quality bases) assembled on 2009-08-11
> FMO07801.5prime
CAGTCGACATGGTTAAGGTTGTGGAGGACATCTTTGGTATTGCGACCAAT
CCGTTTACCAAACAGGCCCAAGTGATTCGTCGCTACACGATGACCAACAC
CAATCGCCTGTCCGTGGCCATCATCCAGCTGGGCGCAACAATCCAGAGCA
TTCAAGTGCCAGATGCCTATCACCAGTTGTCCGATGTGGTCCTCGGATTC
GATGATGTTGCCGGGTATACGAAATATAGAAATTATCATTTTGGTTGCAC
GATTGGCAGAGTCTCGGATGTGGTGGGCAACGGCGAGTTCATCATGGACG
AGCGACGTGTCGTTGTATCCAAAAATCTCGGCCAGAAACACCAAACTAAT
GGTGGCTTTGTGGGCTTCGATCAGGTCATTTGGGATCTGGAAATGAAACG
ACCGGATGGCGTCACCTTGCGTCATATATCCCCGGATGGACACGAAGGTT
ATCCTGGGACCTTGAAAGTATTACTTCACTTCACCATAAATGACGACAAT
CGTTTTTTTATACAAATTGAAGCTACCACTAATCAAACGACGCCGGTAAA
TATATCCAATCATATCATCTTTAATCTGGCTGGCCAGTCTACCGGAATCA
AGGGCATTTTTGACCATCAAATCAATATTGAGGCAATAGAAACGATGGAA
ACATCAAATGGCGACGGACTTCCCACGGGTCGATTTAAGAACGTTAATGA
TTCCGTATACGATATCCGATTGCCAGTATTCATGGGCGACCGAGTGCGTC
AGTTTGAAAAGAAACCGGTAAAGGGTTACGATGTTTGCTTTGCTCTCGAC
AAGGAGTTTGATGCAATTAGAACGCGTTATGTGGGCAGATTTTTGCATCC
GGATTCGGGCAGATTTATGGAAATATTCAGCAATCAGCCGTGTGTTAAAT
TCACCACCGGCAATTGTTTTCCCAGGACCGCTGTGAGCCACCATATGGGT
AAAAAGTGCACCCGCTATTGGCAACATTGTGGCTTTAGTCTTCAGCTACT
TACTATCCCGATGCCGTAAATCAGCCGGAATTTCACGCATCTCATCAATC
CGGCGGCCATTATTCATGAAGCACTACATTTGGCCGTCAGAATCTGATGC
TGCCGAATCCGAGGAACTGGAACCTGGCAGAAC
FMO07801.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10996-RA | 1250 | CG10996-RA | 20..1085 | 9..1064 | 5015 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13796566..13797619 | 1053..9 | 4820 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:00:06 has no hits.
FMO07801.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:33 Download gff for
FMO07801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10996-RA | 20..1093 | 9..1070 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:01 Download gff for
FMO07801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10996-RA | 20..1093 | 9..1070 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:22 Download gff for
FMO07801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10996-RA | 20..1093 | 9..1070 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:22 Download gff for
FMO07801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13796592..13797619 | 9..1029 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:01 Download gff for
FMO07801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13690625..13691652 | 9..1029 | 99 | | Minus |
