FMO07805.5prime Sequence
996 bp (996 high quality bases) assembled on 2009-08-11
> FMO07805.5prime
CAGTCGACATGGCTGTGCTACCACCAGATCCTGTATTCAGCCTGCGCTCC
CCCGACATGGGAGCCGTCAACTCTCTGTGTTTCCAGGAGAGCGACCGATT
GCTGGCGGGAACCATCAAAGGCAGCGTTTTCCTCTGGGATTTGCAAACCA
ACCGCTCCGCTCTGCACTTTGAGGTGGGATCCGACCCCATAACCAGTCTG
CACCACACCCCTGATCGCCTGGTGACCCAGGAGAAGGGCGGCACTATCAC
CATGTTCTCCATCGGCGGCAGTAGCTACGTTAAAGAGCGCAGTATTCCAG
GCAATCACCTGGGCTTTTGCCGATCTGCCTTGCACACGAACACCAGCAAG
ACCAACGAGCAGCTGCTCTTCTATCCCTGCGAGGAATCGTCCATCGGAGT
GCTTCACGTTACGGATGCAGCGGCCCCCACGCAAATACTGGTCCCAGATG
ATCCCCAACTGCCCAAACTGGGTAGCGTCACCTGCTTCAAGCCCTTCGAG
TGCGCCTCGCAACTGTTCCTGCTCGCTGGCTACGAATCGGGACACTTCCT
CACCTGGGACATCAGCTCGAGCGTTATTTTGGATGTGATGGAATTGGCCC
AAGATGCTACGTCTGTGGACTACGATCCAGTTACGAATCGTGGCATTGTG
GGTGGTCCAACCGACAAGTTGATTAGTTTCAGTTATCAGCGCTCATCGAT
GCAAATGCAGCTCGGCTCGGAGCTGTGCATCAAGAATCCTGGAGTGAATG
GCGTTCGCATTCGGCCCGATCAGAAGGTGTTCGCCAGTGCCGGCTGGGAT
GGTCGTATTCGGATCTTCTCGTGGAAAAGCCTGCGACCGCTGGCCGTGCT
TACGCAGCACAAGAATGGCGGCGTAATGGACTTGGTCTTCTCCAGCCAAC
AGGGGCCATGTGGCATGCTCCCATCATGGCAGCAGCGGGGCATGGATGGC
CAGATATCATTGGTGGGACCTCTACACGCAAGCTTTCTAGACATTC
FMO07805.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13192-RA | 1343 | CG13192-RA | 72..1038 | 9..976 | 4755 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11825901..11826414 | 147..660 | 2570 | 100 | Plus |
| 2R | 25286936 | 2R | 11826478..11826792 | 661..976 | 1420 | 98.7 | Plus |
| 2R | 25286936 | 2R | 11825416..11825553 | 9..146 | 690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:42:24 has no hits.
FMO07805.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:31 Download gff for
FMO07805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13192-RA | 1..972 | 9..980 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:12 Download gff for
FMO07805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13192-RA | 72..1046 | 9..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:29 Download gff for
FMO07805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13192-RA | 72..1046 | 9..984 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:29 Download gff for
FMO07805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11825416..11825553 | 9..146 | 100 | -> | Plus |
| 2R | 11825901..11826414 | 147..660 | 100 | -> | Plus |
| 2R | 11826478..11826800 | 661..984 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:12 Download gff for
FMO07805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7712921..7713058 | 9..146 | 100 | -> | Plus |
| arm_2R | 7713406..7713919 | 147..660 | 100 | -> | Plus |
| arm_2R | 7713983..7714305 | 661..984 | 97 | | Plus |
