Clone FMO07809 Report

Search the DGRC for FMO07809

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:78
Well:9
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07809.5prime Sequence

712 bp (-87 high quality bases) assembled on 2009-08-11

> FMO07809.5prime
CAATCCACATGGAGGGAGCCATTTTCTTCGTCATCATCCACGGCACCGTC
TATTTGGGCGGATTGGGCGTGGTTATTCACCGGAATTTCGACACCGGACG
CATGGACTGGCCTGAATTGACGCTGGATCCCAAGGTGCGAATGTCCATGT
TGGCGATGACGGTGGGCAACGTGGCACACAACTCGTATAACCTCTGATGC
AATCACATCATCACCCTACGATACCTGTCACTGCCCGGATTAAAGCAGAT
GGCCCAGTGCTCGTTCCTCTTCATTTCCGGATTGGTTCTTCTGATGGCCA
TCTGCATGTACAAAGGCCTCCTGCTATCCGCAACCTACTACGACTGTGAT
CCATTGACCACGAAGTTGGCGGTGGCCAAGGATCAATTGGTTCCCCTGCT
CGTGGTGCAATCCATGAGCGCATTTCCCGGACTTCCCGGCATGTTTGTGG
CCGGAGTGCTTAGAGCCACCCTCTGTTCTCTGTCCACGATCATGAATTCC
CTAGCCGCTGTTTTCCTAGAGGATTACATCAGGCCCTTGACGAGGAAGCC
GCTTACGGAACACCGAACTGGTGGTATCATGCGTGTGTGTACCGTTTTAA
TTGGAGTCATGACTGTGGCCCTGTTTTTTGATGTGAACCACATGGGCTCC
CATGTAATGCAACTTTCCATGACCGTTGGATCGGTGGGACAGGGTCCCAT
GCTGGCTCTTTT

FMO07809.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG42235-RB 2359 CG8934-RA 1149..1852 9..712 3010 95.2 Plus
CG42235-RA 2561 CG8932-RA 1165..1804 25..664 1040 78.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25913870..25914218 364..712 1430 94 Plus
3R 32079331 3R 25913565..25913818 116..369 1150 96.9 Plus
3R 32079331 3R 25911814..25912114 364..664 665 81.4 Plus
3R 32079331 3R 25913337..25913443 9..115 445 94.4 Plus
3R 32079331 3R 25911254..25911344 25..115 230 83.5 Plus
Blast to na_te.dros performed on 2014-11-28 22:40:31 has no hits.

FMO07809.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:34 Download gff for FMO07809.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42235-RB 1138..1844 3..712 94   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:34 Download gff for FMO07809.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42235-RB 1138..1844 3..712 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:27 Download gff for FMO07809.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42235-RB 1146..1852 3..712 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:27 Download gff for FMO07809.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25913334..25913443 3..115 91 -> Plus
3R 25913565..25913814 116..365 97 -> Plus
3R 25913872..25914218 366..712 93   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:34 Download gff for FMO07809.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21739056..21739165 3..115 91 -> Plus
arm_3R 21739287..21739536 116..365 97 -> Plus
arm_3R 21739594..21739940 366..712 93   Plus