FMO07809.5prime Sequence
712 bp (-87 high quality bases) assembled on 2009-08-11
> FMO07809.5prime
CAATCCACATGGAGGGAGCCATTTTCTTCGTCATCATCCACGGCACCGTC
TATTTGGGCGGATTGGGCGTGGTTATTCACCGGAATTTCGACACCGGACG
CATGGACTGGCCTGAATTGACGCTGGATCCCAAGGTGCGAATGTCCATGT
TGGCGATGACGGTGGGCAACGTGGCACACAACTCGTATAACCTCTGATGC
AATCACATCATCACCCTACGATACCTGTCACTGCCCGGATTAAAGCAGAT
GGCCCAGTGCTCGTTCCTCTTCATTTCCGGATTGGTTCTTCTGATGGCCA
TCTGCATGTACAAAGGCCTCCTGCTATCCGCAACCTACTACGACTGTGAT
CCATTGACCACGAAGTTGGCGGTGGCCAAGGATCAATTGGTTCCCCTGCT
CGTGGTGCAATCCATGAGCGCATTTCCCGGACTTCCCGGCATGTTTGTGG
CCGGAGTGCTTAGAGCCACCCTCTGTTCTCTGTCCACGATCATGAATTCC
CTAGCCGCTGTTTTCCTAGAGGATTACATCAGGCCCTTGACGAGGAAGCC
GCTTACGGAACACCGAACTGGTGGTATCATGCGTGTGTGTACCGTTTTAA
TTGGAGTCATGACTGTGGCCCTGTTTTTTGATGTGAACCACATGGGCTCC
CATGTAATGCAACTTTCCATGACCGTTGGATCGGTGGGACAGGGTCCCAT
GCTGGCTCTTTT
FMO07809.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42235-RB | 2359 | CG8934-RA | 1149..1852 | 9..712 | 3010 | 95.2 | Plus |
CG42235-RA | 2561 | CG8932-RA | 1165..1804 | 25..664 | 1040 | 78.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25913870..25914218 | 364..712 | 1430 | 94 | Plus |
3R | 32079331 | 3R | 25913565..25913818 | 116..369 | 1150 | 96.9 | Plus |
3R | 32079331 | 3R | 25911814..25912114 | 364..664 | 665 | 81.4 | Plus |
3R | 32079331 | 3R | 25913337..25913443 | 9..115 | 445 | 94.4 | Plus |
3R | 32079331 | 3R | 25911254..25911344 | 25..115 | 230 | 83.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:31 has no hits.
FMO07809.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:34 Download gff for
FMO07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42235-RB | 1138..1844 | 3..712 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:34 Download gff for
FMO07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42235-RB | 1138..1844 | 3..712 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:27 Download gff for
FMO07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42235-RB | 1146..1852 | 3..712 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:27 Download gff for
FMO07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25913334..25913443 | 3..115 | 91 | -> | Plus |
3R | 25913565..25913814 | 116..365 | 97 | -> | Plus |
3R | 25913872..25914218 | 366..712 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:34 Download gff for
FMO07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21739056..21739165 | 3..115 | 91 | -> | Plus |
arm_3R | 21739287..21739536 | 116..365 | 97 | -> | Plus |
arm_3R | 21739594..21739940 | 366..712 | 93 | | Plus |