FMO07814.5prime Sequence
743 bp (743 high quality bases) assembled on 2009-08-11
> FMO07814.5prime
CAGTCGACATGACAACTGCCGAATTGCAAGGTTCCTATGGAGGCCTCTAC
TTTGGCTTCTGCACACTGATCTCGCATGTGCTTCTGGCGGGGATCACCGT
AGCCATTGTTTACAAGTGTCTGGTGCTCAAATTGGTGCACACCGCCGGAC
ATGCCTTCTACTGCACAATCGGCTTTGTGTTTTTCATGGGCGAAGCATTG
CTGGTCCGGAATAGCGCATATTTGGAGTCCTCGTTGGGTCCATTGAACCT
CAACCGCCTGCACGCCGTCCTGGGGCTGTTGGCATTCCTGGTCGGAGCCG
GCGGAATCGGAATCAAGACATGGCAGAAGCTGGAGCGCAAACGGGAAGAC
CCCAATGCCACCGTTCGTCACTTTAAGAGCAACCATGCTTTTTACGGTAT
AATCGGTTGTGCTCTTCTTCTGGGTAGCGTTCTGAGCGGTCTTCCGCTGT
ATTTCATCAACAGTGGCTTCGCCTTGAAAATGCTTCATCGATTTTTCGGA
TTGTCCGGATTCCTCGTTCTGATGGTATCTCAAATGTTCGGATATAACAC
GGGATTCGGTCGGCGACAGTGGAAGGCACACCACCAGAAGCTCTTCAAAT
TTTTCACATTTATTGCCACCATTACGACTGCAAATTACGAACTCCGGAGA
TTTGTGCGAGATGTTGCCGGCTTGGCGACAGACTATTTTATTGGATCAGA
TGCAGCAGAAGCTAGAGAAGATCTTGCAAGCTTTCTAGACCAT
FMO07814.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10337-RA | 1297 | CG10337-RA | 149..865 | 9..725 | 3585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19545808..19546137 | 725..396 | 1650 | 100 | Minus |
| 2L | 23513712 | 2L | 19546201..19546425 | 398..174 | 1125 | 100 | Minus |
| 2L | 23513712 | 2L | 19546647..19546811 | 173..9 | 825 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:59:16 has no hits.
FMO07814.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:32 Download gff for
FMO07814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10337-RA | 97..827 | 1..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:43 Download gff for
FMO07814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10337-RA | 142..872 | 1..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:56 Download gff for
FMO07814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10337-RA | 142..872 | 1..732 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:56 Download gff for
FMO07814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19545801..19546136 | 397..732 | 99 | <- | Minus |
| 2L | 19546203..19546425 | 174..396 | 100 | <- | Minus |
| 2L | 19546647..19546815 | 1..173 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:43 Download gff for
FMO07814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19545801..19546136 | 397..732 | 99 | <- | Minus |
| arm_2L | 19546203..19546425 | 174..396 | 100 | <- | Minus |
| arm_2L | 19546647..19546815 | 1..173 | 97 | | Minus |
