FMO07818.5prime Sequence
1183 bp (1021 high quality bases) assembled on 2009-08-11
> FMO07818.5prime
CAGTCGACATGTCCGACAACGATGATATCGTAAACCCCAATGAGCACCTG
ATTATTCCGGATTGGATCAATGAAAAGTATTTCGAGAGTGTACTGGCCAA
GGACGAACCCGATCATGTCAAGGTCCTGAAGTTCACGGTAGTGGCGGCGA
TTCCGCCGGGCGAAAATTTCACTTCGACCATGCTAAGGGTTTATATCAAA
CTGGAAATGAAAGATGGTAGTGTCAAGACCAAAACATACATTTTCAAGAC
GATGCTGCCCGAGGAGCGAGGAGGCAGCGACATCAACGAGTTTGGCCTCT
TTCCCAAGGAGGCAATGATGTACAAGACATACCTTCCTGCATTCGAAGCC
CTATACAAGGATGTCGGTTGGGACATTCAGTTGGCGCCCAAGTGCCTGCA
CACCGAGGAGCGTGAGGGTGACATCCATTTCATCTTCGAGGATCTGTGCG
TTAAGAGGTTTAAGAACATGGATCGCACGAAGGGCCTGGACATGGAGCAC
ATGACCAAGTGCCTGCAAAAGCTGGCCGAGTATCATGCGGCCAGTGCGGT
TTACGAGGAGCTGCATGGTCCCTATCCCAGCGAGTTCAGTGAGGGATTCG
TTAAGAAGGATGTGAAAAAATTCCACGTCGATGGGTTCCAGCTGAAGGAG
AAGGCCTACAAGAAGGCAATGCTCTCGTGGGGTTTGAAAGACGCCGATAA
ATATATTAAGGCATTTCCCACTGTTAAGCAATATTGGGCGCAATGTCTTA
GTACTTTTGGAATTAAATCCCGATGATTTCATGTGCTTAACCACGGCGAC
TTTTGGTCGAGCAATCTGATGAGCAGCTATCTGCCGGACGGAACTCTCGA
GAAGCTGATACTAATCGACTTCCAGATTGTCATGTGGGGGTAGTCCGGCC
ATGGACCTGCTTTTTCTTTCCTCACCCTCTCCCCCACAACGATTTGCGCA
TCAAGGAGTTCGACCATTTTGTAAGGATATACTGGGACGTCTGGTCGAGT
GCTTGGAGGTTTTGAAGCTGAAAGCCCCTGCTAAAACTTCGTGAATGTCC
AAACCTCCATGAACAAATAGACAACTCTCCTTTATTGCTTCTTCAGCATC
CTGGAAACCACCTGCCATTTATTCTCTTTCCCACCGACAGGGACGGCACA
TACCCAACTTATTCCGCTAATACGAGGAAGGCA
FMO07818.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31288-RA | 1377 | CG31288-RA | 58..1229 | 9..1181 | 5245 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25298701..25299205 | 716..212 | 2525 | 100 | Minus |
| 3R | 32079331 | 3R | 25298288..25298637 | 1066..717 | 1240 | 95.2 | Minus |
| 3R | 32079331 | 3R | 25299296..25299500 | 213..9 | 1025 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:02:39 has no hits.
FMO07818.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:37:32 Download gff for
FMO07818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31288-RA | 53..1229 | 4..1182 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:19 Download gff for
FMO07818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31288-RA | 53..1229 | 4..1182 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:43 Download gff for
FMO07818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31288-RA | 53..1229 | 4..1182 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:43 Download gff for
FMO07818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25298268..25298637 | 717..1087 | 94 | <- | Minus |
| 3R | 25298701..25299203 | 214..716 | 100 | <- | Minus |
| 3R | 25299296..25299505 | 4..213 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:19 Download gff for
FMO07818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21123990..21124359 | 717..1087 | 94 | <- | Minus |
| arm_3R | 21124423..21124925 | 214..716 | 100 | <- | Minus |
| arm_3R | 21125018..21125227 | 4..213 | 98 | | Minus |
