FMO07819.5prime Sequence
1107 bp (1002 high quality bases) assembled on 2009-08-11
> FMO07819.5prime
CAGTCGACATGAGTGCCTGTTCAGAACCAACTACTTTTTCAAAAACCAAG
GAGACGGCCAAGATCGTCATAATCGGAGCTGGTGCTTCGGGAGTAGCAGC
AGCTACTAAACTTTTGGAACAAGGATTCAAAAATGTCCTGCTCTTCGAGG
CGGAAGACCGGATTGGAGGTCGCATCAACACGATCCTGTTTGCCAACAGC
TTAATCGATCTGGGTGCTCAATGGTGCCACGGTGAAGAAGGAAATGTTGT
CTATGAAAAAGTTAAGGACCTGGATGTCCTCGACAGGACCGGCGACTATG
TCGTTCACTTTATTCGCTCTAACAAGGAAATTCTCACTGACGTTCATAAC
AAGGCTCTTACGGAATTGACGAACGCATTTGAGGTGCCTGGCGAACATGA
GGGTTCCGTAGGTGATGCCTTTAATGCCTATTGGAAGGAGAATATCCATC
AGTTGGTTCCGAACGATAAGACCATTGCCAAGGAGGCCCAAGACTGCCTG
AAAAAGGTAATTTGCAGCATGGATGCTTGCGATAATTTGTCCGAGCTTTC
TTACCGAAATTTCCGGAACTTTGCTATTGCCGGTGGGGATCAAAATCTCA
GCTGGCGGCAAAAGGGCTATTGGAAATTTTTGAGTGTCCTGCTAAATTCT
AGCGATAATCAGCCCGGTGACCAGGGAATTCTTAAAGGACATGTGCATCT
CAACAAACGAATTGCTAAGATCAATTGGGAAGGAGATGGTGAATTGACTC
TCCGCTGCTGGAACGGCCAATTTGTTTCAGCGGATCATGTGATTTGTACT
GTCTCATTGGGGGTTCTCAGGAAAAGCACCATAAGCTCTTTGTACAGCTC
TGCCAGCCTCCAAGATCAGGTCGATAGAGGGTCTCAAACTGGGGACAGTG
ACAAGTTCTATTTGGAGTTTGAGAGCAGCAGTGCCGAAAACATTAGAGAA
ATGGCGTTCTTTGCTGAGAAGATCTAAAGGAGCTACGAGTGGCAATACTT
TTGCTGGAGAGTGTTTGTTTTTTTCATCGTGTGATTGTCAACGCGTTGTT
AAGGGATGGAATCTATTGGTCCCACTCCGGTACGTGAAACCATCAGCGAA
GAACAGT
FMO07819.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6034-RA | 1688 | CG6034-RA | 48..1164 | 8..1106 | 5000 | 97.8 | Plus |
| CG7460-RC | 1814 | CG7460-RC | 792..1035 | 685..924 | 265 | 75 | Plus |
| CG7460-RB | 2001 | CG7460-RB | 979..1222 | 685..924 | 265 | 75 | Plus |
| CG7460-RC | 1814 | CG7460-RC | 218..359 | 131..272 | 215 | 76.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17745775..17746813 | 1033..8 | 4555 | 98.4 | Minus |
| 3L | 28110227 | 3L | 17740944..17741085 | 131..272 | 215 | 76.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:06:33 has no hits.
FMO07819.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:37:33 Download gff for
FMO07819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6034-RA | 1..1116 | 9..1107 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:25 Download gff for
FMO07819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6034-RA | 48..1164 | 8..1107 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:56 Download gff for
FMO07819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6034-RA | 48..1164 | 8..1107 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:56 Download gff for
FMO07819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17745695..17746813 | 8..1107 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:25 Download gff for
FMO07819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17738795..17739913 | 8..1107 | 97 | | Minus |
