FMO07821.5prime Sequence
1142 bp (922 high quality bases) assembled on 2009-08-11
> FMO07821.5prime
CAGTCGACATGAATCCAAACGATACTTTATCCGCCTTCTCACTTCTCTTG
TGCGTCCTGATTCTTTCCGCTGGACGCGGCGAATTACTTTTTAATGCGGA
TGACAATGTGGTGCAGCTGGATTTTGCATCATTCGAGTCCGGACTTAGTG
AACCAACGTCTGGGAAACTGGTGCAGTTCTTTAACGGATTCTGCGAGGAG
AGCCAGAACTTTATACCAGCGTTTAAGAATCTATCTCGTAAACTTTACAA
GTGGCACCGATTACTCAAAGTCCATGTACTAGATTGTGGAAAGGATGAGA
ACGATATGATATGTAGCATTTACAGCATTCGTAAAACGCCAACTCTGCGA
TATTTTCCACCGAGTTATAAGCTAGCACCAGACAACCTGGGTACCGAGAT
CACTCATCGAAATCCCAAAGAGATACAATCGAAGCTGGCCCTAAATCTTC
AAAAGCTTGATTACTTCAAAATGTTTAAGCGGCAGGACAATGTGGCTCAT
ATATTTCAAACGCACAAGGATATCGAGTACGTTGCTTTTGTTTTCCAAAT
GTGTTTAGACCACTTTCTGCCGCACTTGGAAACGGGCAACTCGATGGAGG
AAAAGTATGCCTCTCAGGGCGATTGCAATGAGGATAATCCAATAGTTTCG
TTGATCGGAAGAAATACCCTTCTTGAATTGCTGCCCTACAGGAAAGTGGT
TGTGCGGATCTTCGACAATCATGATGTTTACAACAAATTTGGCATATCGC
CCGTACCCAACTTTAGTGGTTCTGGTAAATAAAGCTGGAAAACTGCTATT
TCTCACACCCGAGATGGATAGCAGTAAGGCTTATGTGGGCTGCCATTAAG
CAATTACTTGATCTTTGTCGACCTTAAGCCCCATAAACCGTTGCCCAAAA
CCCCACCCGCCAACATAAGTGAAGCCTTAAAGGTATGAGAATAATCGAGC
AGCCACAGGCATCATCCCTTCTCGGATCTATCGAGGCGGATCTGGAACGG
GCTAATCGATCAAATCTTAATGTTAAAGGTCCCAGGGAAACTACGTCCTT
TGGCAGGACAAAGAAAGTGGTTCGGCGAAATTCCGGTAAACTGAAATTAC
ACTCAAGTCCTTGGAGGCTAAAGGCCGCGGGAAAAGCTGGCA
FMO07821.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:32:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31413-RA | 1782 | CG31413-RA | 30..1151 | 9..1142 | 4930 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:32:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23702790..23703911 | 9..1142 | 4625 | 96.1 | Plus |
Blast to na_te.dros performed 2014-11-28 21:32:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 2027..2105 | 509..432 | 113 | 63.7 | Minus |
FMO07821.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:37:34 Download gff for
FMO07821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31413-RA | 27..1017 | 3..1004 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:44 Download gff for
FMO07821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31413-RA | 27..1017 | 3..1004 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:01 Download gff for
FMO07821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31413-RA | 27..1017 | 3..1004 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:01 Download gff for
FMO07821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23702787..23703777 | 3..1004 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:44 Download gff for
FMO07821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19528509..19529499 | 3..1004 | 98 | == | Plus |
