FMO07831.5prime Sequence
978 bp (29 high quality bases) assembled on 2009-08-11
> FMO07831.5prime
CAATCCACATGGCCAACACTATTTCGTTAATGTCCAACGTGATACGCAAT
GTAGTGAGTAAAAAACGTATACGATACAAAGAAAAAGGATACGATTTGGA
TTTAACATACATTAATGATAACATAATTGCCATGGGCTATCCAGCACCGG
ATAAACTAGAGGGCCTATTCAGAAACCGTCTGGAAGATGTCTTTAAGCTA
TTGGAAGAGAATCATGCCCAGCATTACAAAATCTAAAACCTATGCTCGGA
GCGTAGTTACGACGTTGCTAAATTTCGCGGGAGAGTAGCTGTTTATCCGT
TCGATGATCATAACCCTCCAACGATTGAGTTAATACAACGATTTTGCAGT
GATGTTGATATGTGGCTCAAGGAAGATTCGTCCAATGTTGTAGCCGTGCA
CTGTAAAGCTGGAAAGGGCAGAACCGGTACCATGATCTGCGCATATTTAG
TGTTCAGTGGAATTAAAAAATCCGCCGACGAGGCATTAGCGTGGTATGAT
GAGAAGCGTACAAAGGACCGAAAAGGTGTGACAATCCCATCTCAACGTCG
ATATGTTCAGTATTTTTCCAAACTAGTATGTTCGAGTGTTCCATATTCGA
AAGTAAGCCTTAACGTATGTGAAATACGCTTCTCGGAGTCCAGTTGTGTG
CAAAACTTACGCATGGTATAATGTTCAATATCTGTATTACGCGACTCACC
CACAGATAATGCAAAGCCAGATAGACTGAAACCTTGCCGATTGATTTCAA
AAATCATTTGTTTTGACCATTAAACCATCTATACCAGTTTCCGGCGATGT
AAATTTGAACTCACAAAAAATCCCCAGATAAAATCATTTGTCACTTTTGG
CTAATACGTTTTTGTACGAAACTATTCACCTTGCGAGTCCGATGGAACGG
TTAAGAATATATACACACTTTAAGCTAAATCAGAAATCGATGATGTACAT
AAGGAAGTGACATAAATGATTTTCACAA
FMO07831.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pten-RH | 2467 | CG5671-RH | 755..1729 | 9..975 | 4420 | 97.5 | Plus |
Pten-RG | 2617 | CG5671-RG | 912..1886 | 9..975 | 4420 | 97.5 | Plus |
Pten-RC | 1803 | CG5671-RC | 413..1387 | 9..975 | 4420 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10258726..10258916 | 616..426 | 910 | 98.4 | Minus |
2L | 23513712 | 2L | 10259241..10259417 | 281..105 | 855 | 98.9 | Minus |
2L | 23513712 | 2L | 10259026..10259174 | 429..281 | 745 | 100 | Minus |
2L | 23513712 | 2L | 10258235..10258390 | 879..729 | 515 | 96.2 | Minus |
2L | 23513712 | 2L | 10259476..10259575 | 108..9 | 500 | 100 | Minus |
2L | 23513712 | 2L | 10258549..10258656 | 722..615 | 465 | 95.4 | Minus |
2L | 23513712 | 2L | 10258101..10258173 | 952..880 | 240 | 94.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:06:17 has no hits.
FMO07831.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:01 Download gff for
FMO07831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pten-RB | 605..1585 | 2..976 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:16 Download gff for
FMO07831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pten-RC | 407..1387 | 2..976 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:46 Download gff for
FMO07831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pten-RC | 407..1387 | 2..976 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:46 Download gff for
FMO07831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10259029..10259173 | 282..426 | 100 | <- | Minus |
2L | 10259241..10259413 | 109..281 | 99 | <- | Minus |
2L | 10259476..10259578 | 2..108 | 96 | | Minus |
2L | 10258235..10258397 | 723..879 | 95 | <- | Minus |
2L | 10258549..10258656 | 615..722 | 95 | <- | Minus |
2L | 10258728..10258915 | 427..614 | 98 | <- | Minus |
2L | 10258075..10258173 | 880..976 | 91 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:16 Download gff for
FMO07831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10258549..10258656 | 615..722 | 95 | <- | Minus |
arm_2L | 10258235..10258397 | 723..879 | 95 | <- | Minus |
arm_2L | 10258728..10258915 | 427..614 | 98 | <- | Minus |
arm_2L | 10259029..10259173 | 282..426 | 100 | <- | Minus |
arm_2L | 10258075..10258173 | 880..976 | 91 | <- | Minus |
arm_2L | 10259241..10259413 | 109..281 | 99 | <- | Minus |
arm_2L | 10259476..10259578 | 2..108 | 96 | | Minus |