FMO07833.5prime Sequence
779 bp (779 high quality bases) assembled on 2009-08-11
> FMO07833.5prime
CAGTCGACATGGCCCTGCCGCAAAAGCACTTCAAGAGGGGTTCCACCAAG
CCCGAGCTGCCAGAAGATGGAGTTCCTCGTTTCTTTTCCATGGCATTCTG
CCCCTTCAGCCACCGAGTTCGTCTGATGCTGGCCGCCAAACATATTGAAC
ATCATAAGATCTACGTCGATTTGATTGAGAAGCCTGAATGGTACAAGGAT
TTCAGTCCTCTGGGCAAAGTGCCAGCCCTGCAGCTTACTGGGGTGAAGGA
CCAACCGACCCTCGTGGAGTCGCTCATCATAGCAGAGTACTTGGACCAGC
AATATCCCCAGACGCGACTCTTTCCCACGGATCCGCTTCAGAAGGCGCTG
GACAAGATTCTAATCGAACGTTTTGCTCCAGTGGTCAGTGCCATTTATCC
TGTGCTGACTTGTAATCCCAACGCTCCGAAAGATGCCATACCGAACTTCG
AGAATGCCTTGGATGTTTTTGAAGTGGAGTTGGGCAAAAGAGGAACGCCC
TACTTTGCCGGCCAGCACATTGGAATCGTGGACTACATGATTTGGCCTTG
GTTCGAACGTTTTCCCAGCATGAAGATCAATACGGAGCAAAAGTATGAGC
TGGATACAAAACGATTTGAGAAGCTGCTCAAGTGGCGCGATTTGATGACC
CAGGATGAGGTTGTGCAGAAGACAGCTTTGGATGTCCAGTTGCATGCTGA
GTTCCAGAAATCGAAGACCCTTGGAAATCCCCAGTACGACATTGCCTTCA
AGGGTACACCAGCAAGCTTTCTAGACCAT
FMO07833.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstO2-RA | 932 | CG6673-RA | 71..823 | 9..761 | 3765 | 100 | Plus |
| GstO2-RB | 912 | CG6673-RB | 71..472 | 9..407 | 280 | 72.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8521732..8522319 | 626..39 | 2940 | 100 | Minus |
| 3L | 28110227 | 3L | 8521538..8521673 | 761..626 | 680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:48 has no hits.
FMO07833.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:06 Download gff for
FMO07833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6673-RA | 70..822 | 9..761 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:29 Download gff for
FMO07833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstO2-RA | 71..823 | 9..761 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:48 Download gff for
FMO07833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstO2-RA | 71..823 | 9..761 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:48 Download gff for
FMO07833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8521538..8521672 | 627..761 | 100 | <- | Minus |
| 3L | 8521732..8522318 | 40..626 | 100 | <- | Minus |
| 3L | 8523401..8523431 | 9..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:29 Download gff for
FMO07833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8514638..8514772 | 627..761 | 100 | <- | Minus |
| arm_3L | 8514832..8515418 | 40..626 | 100 | <- | Minus |
| arm_3L | 8516501..8516531 | 9..39 | 100 | | Minus |
