FMO07837.5prime Sequence
482 bp (482 high quality bases) assembled on 2009-08-11
> FMO07837.5prime
CAGTCGACATGTCGCTCGTCATCCCAGAGAAGTTCCAGCACATCCTGCGT
ATCATGAATACGAACATCGACGGCAAGCGCAAGGTTGGCATCGCCATGAC
CGCCATCAAGGGAGTGGGTCGCCGCTACTCCAACATTGTGCTGAAGAAGG
CCGATGTCGATCTTACCAAGCGCGCCGGTGAGTGCACCGAGGAGGAGGTC
GACAAGGTGGTGACCATCATCTCGAACCCTCTGCAGTACAAGGTGCCCAA
CTGGTTCCTCAACAGGCAGAAGGACATCATCGATGGCAAGTACTGGCAGC
TGACCTCCTCCAACTTGGACTCGAAGCTGCGTGACGATCTGGAGCGTCTG
AAGAAGATCCGCTCCCACCGTGGTCTGCGTCACTACTGGGGCCTCCGTGT
GCGTGGCCAGCACACCAAGACCACCGGTCGTCGTGGTCGCACCGTGGGTG
TGTCCAAGAAGAAGGCAAGCTTTCTAGACCAT
FMO07837.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS18-RA | 583 | CG8900-RA | 39..494 | 9..464 | 2280 | 100 | Plus |
| RpS18-RB | 606 | CG8900-RB | 62..517 | 9..464 | 2280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20264491..20264759 | 196..464 | 1345 | 100 | Plus |
| 2R | 25286936 | 2R | 20264246..20264434 | 11..199 | 945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:32:40 has no hits.
FMO07837.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:19 Download gff for
FMO07837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS18-RA | 34..505 | 1..477 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:13 Download gff for
FMO07837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS18-RB | 55..526 | 1..477 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:09 Download gff for
FMO07837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS18-RB | 55..526 | 1..477 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:09 Download gff for
FMO07837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20264236..20264432 | 1..197 | 97 | -> | Plus |
| 2R | 20264493..20264768 | 198..477 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:13 Download gff for
FMO07837.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16151741..16151937 | 1..197 | 97 | -> | Plus |
| arm_2R | 16151998..16152273 | 198..477 | 98 | | Plus |
