FMO07838.5prime Sequence
485 bp (485 high quality bases) assembled on 2009-08-11
> FMO07838.5prime
CAGTCGACATGGAGGGGGACAAGGTAGTTTTTCATAGTTCTGATCTACCA
TACGAATATTTATACGACGACGAAAAACACGTTTCGCACATGCCGGATTC
CAAATTAAGTGTACGAAATATTTTGGATTCAGCTTACGCTTCTGCTGAAG
GCAAAATTATAACTAGGAAACTTTCGCGCAGCATTCCGCCGTATCCGCAT
GCTGTTCGAGTAAAAAATGGCATTCGTGTTTATGAATACAGTGAGCCCAG
AAAACAGAGCTACAAATCAAGTTTATGGAAGGAGGCCTACAATATACTCC
ACCAGCGGTTGGATATTGCCGAGCCAATCGCAGCAAAGGAACACGTGAGA
ACGCAGATACATCCGTGTCTGCACAAGATCAAAGGACTTCTAGATCCGGA
AACCTGCATCAAGTGTCCGCGGTGTCATAAGTCCATTTCGTCCACCAAAG
TTGTGAAAAGCTTTGCAGCAAGCTTTCTAGACCAT
FMO07838.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31955-RD | 900 | CG31955-RD | 323..782 | 8..467 | 2300 | 100 | Plus |
| CG31955-RC | 777 | CG31955-RC | 84..543 | 8..467 | 2300 | 100 | Plus |
| CG31955-RA | 661 | CG31955-RA | 84..543 | 8..467 | 2300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3712498..3712783 | 293..8 | 1430 | 100 | Minus |
| 2L | 23513712 | 2L | 3712272..3712445 | 467..294 | 870 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:44:54 has no hits.
FMO07838.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:31 Download gff for
FMO07838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31955-RA | 75..539 | 1..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:56 Download gff for
FMO07838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31955-RA | 79..543 | 1..467 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:42 Download gff for
FMO07838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31955-RA | 79..543 | 1..467 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:42 Download gff for
FMO07838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3712498..3712786 | 1..293 | 98 | | Minus |
| 2L | 3712273..3712445 | 294..466 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:56 Download gff for
FMO07838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3712273..3712445 | 294..466 | 100 | <- | Minus |
| arm_2L | 3712498..3712786 | 1..293 | 98 | | Minus |
