FMO07846.5prime Sequence
880 bp (644 high quality bases) assembled on 2009-08-11
> FMO07846.5prime
CAATCGACATGTTAGAGGAACTTGCAAAAGACGACGAGAACATGGATGGA
AACCACACCGATGCTAATCAGATCATCAAGGATCGCCGAAGACAGGAGGA
GCATTATTTCAAGCTTTATGGCCGCATTGAGATACACGAATGGCTGTTGA
AGGATTCAGTCCGAATTAAAGCCTACCGCGAGGCCATCCAGCACAACGAG
TTCTTCAGGCACAAGACTGTCCTGGATGTTGGCTGCGGCATGGGCGTCCT
TTCGATGTTCGCAGCCAAGGCGGGTTCCAAAAGGGTCCTGGCAGTAGAGG
CGGCCACCATTTCGGAATTTGCCCAACAGGTAGTCCAGGATAATGAATTC
GGCAGAATTATACAGGTGATTCAGGGAAAAGTAGAGGACATTGAACTGCC
TGATGGGATCAAAAAGGTGGATATTATAGTGTGCGACTGGATGGGCTCCT
GCCTGTTTTCTGGAAATATGCTCGAGTCGTTATTATTTGCGCGGGAAAAG
TGGCTATCGGCCACCGGCCACATCTATCCGGACACAGCGCAACTTTATCT
GGCGGCCATCAAGGGACGCGACCAGGATCTTGGATTCTGGCACGATGTGC
ACGGCTTCCACCTGTCCGCCATCCGGCGCAAATGCGAATCCAAGGCGGTG
GTGGATCACGTGACCGGTGACCAGATGATGAGCAGGGTGTGCCTGGTCAA
ATCGCTGGATCTGTACCCCGAGCCCCGCCAATCCGCCAAGTCTCGTTCGC
TATTCTAGCTAAAGGTCATCGAAAAGGCTTGGGTTCACGGCCTGGTGGCC
TATTTTTGTGTCGGATTCACATAATACGCAAAGGATCACTCCACAAATTC
CCCCTCTGCTCCGGGGACCCTTTGAACCTA
FMO07846.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art2-RB | 1595 | CG3675-RB | 185..1053 | 9..874 | 3820 | 96.4 | Plus |
| Art2-RA | 1436 | CG3675-RA | 26..894 | 9..874 | 3820 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4278238..4278670 | 874..445 | 1600 | 92.4 | Minus |
| 2L | 23513712 | 2L | 4278796..4279029 | 445..212 | 1155 | 99.6 | Minus |
| 2L | 23513712 | 2L | 4279084..4279290 | 215..9 | 1020 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:33:07 has no hits.
FMO07846.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:12 Download gff for
FMO07846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art2-RA | 1..874 | 9..879 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:51 Download gff for
FMO07846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art2-RA | 17..899 | 1..879 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:07 Download gff for
FMO07846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art2-RA | 17..899 | 1..879 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:07 Download gff for
FMO07846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4278232..4278669 | 446..879 | 92 | <- | Minus |
| 2L | 4278796..4279025 | 216..445 | 99 | <- | Minus |
| 2L | 4279084..4279299 | 1..215 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:51 Download gff for
FMO07846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4278232..4278669 | 446..879 | 92 | <- | Minus |
| arm_2L | 4278796..4279025 | 216..445 | 99 | <- | Minus |
| arm_2L | 4279084..4279299 | 1..215 | 97 | | Minus |
