FMO07847.5prime Sequence
1118 bp (954 high quality bases) assembled on 2009-08-11
> FMO07847.5prime
CAGTCGACATGGATCGCTATGAGAAGCTCAGTCGGCTGGGCGAGGGCTCC
TACGGTGTGGTCTACAAGTGCCGGGATCGGGAAACGGGTGCTCTGGTGGC
GGTCAAGAGGTTTGTGGAGTCCGAGGATGATCCAGCGATTCGTAAAATTG
CACTGCGAGAAATTAGGCTACTGAAGAACCTGAAGCATCCGAACCTTGTC
TCCCTGCTAGAAGTGTTCCGACGGAAGCGACGCCTCCATCTGGTCTTCGA
GTTCTGCGAGCTGACCGTGCTGCACGAACTGGAGCGGCATCCACAGGGCT
GCCCGGAGCACCTGACCAAACAGATCTGCTACCAGACCCTGCTGGGCGTG
GCCTACTGCCACAAGCAGGGCTGCCTACACCGCGACATCAAGCCGGAGAA
CATTCTGCTGACGGCCCAGGGTCAGGTGAAGCTGTGTGACTTCGGCTTCG
CCCGGATGCTCAGTCCGGGCGAGAATTACACGGACTACGTGGCCACCAGA
TGGTACCGGGCGCCGGAGCTGCTGGTGGGCGACACTCAGTACGGCACTCC
GGTGGACGTCTGGGCCATCGGTTGCCTCTTCGCCGAGCTGGTCCGGGGCG
AGGCCCTCTGGCCAGGACGTAGCGATGTGGATCAGCTCTATCTGATCCGC
AAGACGCTCGGCGACCTGCTGCCGCGCCACATCCAGATCTTTGGACAGAA
CGAGTACTTTAAGGGCATCACGCTGCCAGTGCCGCCGACGCTGGAGCCGC
TGGAGGACAAGATGCCGGCCAAGTCGCAGCAGAATCCCCCTGACCATTGA
CTTTCTCAAGAAGTGCCTGGACAAGGAACCCGACCAAGCGCTGGTCCTGC
GAGAAGCTCACAAAGCCCCTCCTACTTCGATGACTACATCGCTAAGCAGC
GCGAACTGGAGCACCGTCACCAGCCCTGGAGGCGGCCAATCTCCGCCAGC
AGCAGCTCGCCTCCCAACCAGTTCATGCTGGCCACGGGCGGCCCAGCAAC
TCAGAACGGTTCCTGCTCAGCGGCGGCCATCGCGGGCGGCCCGGAAATAA
ATCAAAGAACTTCAAAAAAAATTAACTATCCGTGGCTGACCCTAGCACGG
CAGCAATTCATTCATCCA
FMO07847.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7236-RB | 1540 | CG7236-RB | 267..1315 | 9..1066 | 4870 | 98.1 | Plus |
CG7236-RE | 1739 | CG7236-RE | 466..1514 | 9..1066 | 4870 | 98.1 | Plus |
CG7236-RD | 1482 | CG7236-RD | 209..1257 | 9..1066 | 4870 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5712476..5713334 | 171..1035 | 3780 | 97.9 | Plus |
2L | 23513712 | 2L | 5712257..5712424 | 9..176 | 840 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:26:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy10 | 6006 | gypsy10 GYPSY10 6006bp | 2271..2331 | 138..197 | 131 | 70.5 | Plus |
FMO07847.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:15 Download gff for
FMO07847.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7236-RA | 321..1376 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:23:28 Download gff for
FMO07847.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7236-RD | 202..1257 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:55 Download gff for
FMO07847.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7236-RD | 202..1257 | 1..1066 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:55 Download gff for
FMO07847.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5712250..5712424 | 1..176 | 98 | -> | Plus |
2L | 5712482..5713354 | 177..1059 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:23:28 Download gff for
FMO07847.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5712250..5712424 | 1..176 | 98 | -> | Plus |
arm_2L | 5712482..5713354 | 177..1059 | 97 | -> | Plus |