Clone FMO07847 Report

Search the DGRC for FMO07847

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:78
Well:47
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07847.5prime Sequence

1118 bp (954 high quality bases) assembled on 2009-08-11

> FMO07847.5prime
CAGTCGACATGGATCGCTATGAGAAGCTCAGTCGGCTGGGCGAGGGCTCC
TACGGTGTGGTCTACAAGTGCCGGGATCGGGAAACGGGTGCTCTGGTGGC
GGTCAAGAGGTTTGTGGAGTCCGAGGATGATCCAGCGATTCGTAAAATTG
CACTGCGAGAAATTAGGCTACTGAAGAACCTGAAGCATCCGAACCTTGTC
TCCCTGCTAGAAGTGTTCCGACGGAAGCGACGCCTCCATCTGGTCTTCGA
GTTCTGCGAGCTGACCGTGCTGCACGAACTGGAGCGGCATCCACAGGGCT
GCCCGGAGCACCTGACCAAACAGATCTGCTACCAGACCCTGCTGGGCGTG
GCCTACTGCCACAAGCAGGGCTGCCTACACCGCGACATCAAGCCGGAGAA
CATTCTGCTGACGGCCCAGGGTCAGGTGAAGCTGTGTGACTTCGGCTTCG
CCCGGATGCTCAGTCCGGGCGAGAATTACACGGACTACGTGGCCACCAGA
TGGTACCGGGCGCCGGAGCTGCTGGTGGGCGACACTCAGTACGGCACTCC
GGTGGACGTCTGGGCCATCGGTTGCCTCTTCGCCGAGCTGGTCCGGGGCG
AGGCCCTCTGGCCAGGACGTAGCGATGTGGATCAGCTCTATCTGATCCGC
AAGACGCTCGGCGACCTGCTGCCGCGCCACATCCAGATCTTTGGACAGAA
CGAGTACTTTAAGGGCATCACGCTGCCAGTGCCGCCGACGCTGGAGCCGC
TGGAGGACAAGATGCCGGCCAAGTCGCAGCAGAATCCCCCTGACCATTGA
CTTTCTCAAGAAGTGCCTGGACAAGGAACCCGACCAAGCGCTGGTCCTGC
GAGAAGCTCACAAAGCCCCTCCTACTTCGATGACTACATCGCTAAGCAGC
GCGAACTGGAGCACCGTCACCAGCCCTGGAGGCGGCCAATCTCCGCCAGC
AGCAGCTCGCCTCCCAACCAGTTCATGCTGGCCACGGGCGGCCCAGCAAC
TCAGAACGGTTCCTGCTCAGCGGCGGCCATCGCGGGCGGCCCGGAAATAA
ATCAAAGAACTTCAAAAAAAATTAACTATCCGTGGCTGACCCTAGCACGG
CAGCAATTCATTCATCCA

FMO07847.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG7236-RB 1540 CG7236-RB 267..1315 9..1066 4870 98.1 Plus
CG7236-RE 1739 CG7236-RE 466..1514 9..1066 4870 98.1 Plus
CG7236-RD 1482 CG7236-RD 209..1257 9..1066 4870 98.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5712476..5713334 171..1035 3780 97.9 Plus
2L 23513712 2L 5712257..5712424 9..176 840 100 Plus
Blast to na_te.dros performed 2014-11-28 23:26:14
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy10 6006 gypsy10 GYPSY10 6006bp 2271..2331 138..197 131 70.5 Plus

FMO07847.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:15 Download gff for FMO07847.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7236-RA 321..1376 1..1066 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:23:28 Download gff for FMO07847.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7236-RD 202..1257 1..1066 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:55 Download gff for FMO07847.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7236-RD 202..1257 1..1066 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:55 Download gff for FMO07847.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5712250..5712424 1..176 98 -> Plus
2L 5712482..5713354 177..1059 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:23:28 Download gff for FMO07847.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5712250..5712424 1..176 98 -> Plus
arm_2L 5712482..5713354 177..1059 97 -> Plus