FMO07854.5prime Sequence
1146 bp (1038 high quality bases) assembled on 2009-08-11
> FMO07854.5prime
CAGTCGACATGGCCATTCTACAGAATAGCCGCCAGAGCCACAAGCAACTC
CCAATCATCAGCCAGACGATTCGCAGTGCTTGGTGCCAACAGAGGCCGAT
TAATGCCATGCATCAGGATGTCCGGCAAAAAAGCATCGGATCCGGAAACG
AGACCAAACTGGAAGCGAAGGAGACGGAAGTTCCCACCAACAGAAGAAGA
CGCAGAAGGCGTTGCAGCAGTAGCTCCACCAGCGACTCAAGCGCATCCTC
ATATTCCTCAACAGACTCGGATTCCGGGTCCTCCACCAGCAGCAGTAGCA
TAAGAAGCCAATTACCCGCCCTCAACTTGCCAGTGCCCCTCCCGCTGGCG
ACACCCACTCCGCCCGCCGTTTCATCGCCTCACCAGGCGCCATCTCCTCG
AAGGAACTCCAGCGACTCCAACCGGAGCGTCTCTCCCGTGGAGGTGCCCG
TGGATCCGCACGCTTGGACGCCCGAGGACATTGCCAGCTGGGTGAGATGG
GCGACGCGCAAGTTCAAACTGGACCCGGAGCCGGATATCGACAGGTTTCC
CAAGGATGCCCAGGAGCTGTGCGATCTGTCTCGCGCGGACTTCTGGGTCT
GTGCAGGATCAAGGCGCGGAGGCATGCTCCTGGCGCAGCACTTCGCGATC
AGCTTATACCACGCCACCGGACGGGAGACGAGTCCGATGCTCAACGACGA
CGAACCAAATCCGTACCAGCTGCTGAACGCTGCCTCGCACCGATTGGTTG
CCCAAGGCTCAGGGGGCCAAATCCAGCTGTGGCAGTTTCTGCTGGAGCTG
CTCGCTGATTCGTCCAACGCGAACGCCATCAGCTGGGAGGGCCAATCGGG
CGAGTTCCGGCTCATCGACCCGGACGAGGGGCCAGGCGGTGGGGCGAGCG
CAAGGCCAAACCGAACATGAACTACGACAGCTGAGCCGGCACTCAGTACT
ACTACGACAGAACATCATGACCAAGGTGCACGGAAAGCGGTATGCCTACA
GTTTGACTTCCACGGTCTGATGGCCGCATGCCAGCTCAGCGCAGGAGGAG
ATCGCCTCCAGTATGGCTGGTTCCTTCAATCACCACGCGGCGGGTGCGAT
GCATTGGGCCGCCACCCGCGCCATGACCCACATCCAAGATTCATTT
FMO07854.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets21C-RD | 2892 | CG2914-RD | 1067..2189 | 9..1119 | 5220 | 98.5 | Plus |
| Ets21C-RC | 4461 | CG2914-RC | 598..1720 | 9..1119 | 5220 | 98.5 | Plus |
| Ets21C-RA | 2423 | CG2914-RA | 598..1720 | 9..1119 | 5220 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 551158..551857 | 708..9 | 3500 | 100 | Minus |
| 2L | 23513712 | 2L | 547986..548218 | 939..709 | 1065 | 99.1 | Minus |
| 2L | 23513712 | 2L | 547719..547900 | 1119..946 | 440 | 91.8 | Minus |
| 3L | 28110227 | 3L | 6118964..6119127 | 765..927 | 215 | 76.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:00:36 has no hits.
FMO07854.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:59 Download gff for
FMO07854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets21C-RA | 591..1740 | 1..1136 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:13 Download gff for
FMO07854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets21C-RA | 591..1740 | 1..1136 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:40 Download gff for
FMO07854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets21C-RA | 591..1740 | 1..1136 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:40 Download gff for
FMO07854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 547978..548218 | 709..946 | 98 | <- | Minus |
| 2L | 551158..551864 | 1..708 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:13 Download gff for
FMO07854.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 547978..548218 | 709..946 | 98 | <- | Minus |
| arm_2L | 551158..551864 | 1..708 | 99 | | Minus |
