FMO07856.5prime Sequence
755 bp (755 high quality bases) assembled on 2009-08-11
> FMO07856.5prime
CAGTCGACATGGTCAACGAACTGAATAGGCCTCAAAATGGGGACAATGCC
GCCTTGAGCGAGCGCCTAGCTGCTTCCAACAGACAGCTGCAAGAGATGCA
GGAGGAGCACCGCCAGTTGCTTGAGGAGATGGAGACACTGCGCTTACGAG
CCGCTGAGCTGACCCTTCTGAATGCCCAGCGCCGACAAGTGCGGCAGTCC
ACCGAGGAGGAGGAGGTTCAGTCCCACGTTGAATCCTCATCGGAGACAGT
AACAGTTGCTTCGTCCGCCAGTGCTTCTGGAGAGTTCACAAACCGGGAAG
AGGCACCATCTGGTGAGGAAGAGGGCGGGGAGGACAAAGAGGAGCAGGCC
AGTTATCTGCAGGAGAAGCTAAACGAGATCGCCAACCTGAAGGCGCAGTT
TAAGCGCGTGCAGAACATGGTGGACACCACCAAGATGATCGAGGAGCACA
TGTCCTCCAGGCAAACGGTACAGGTCCAGAGCTCCACCTCCGTTCAGACC
AGCAGGCAGACCACCTCGTCAGAAGTCCGAGTGGCCAGCGAGGCCGTAGA
GAGTGCCCAAGAAGAGAATCCATCGACCTCGTCGAGTGCTCCCGATAACG
CCGAGCTCCTGAATTCCATGCTTAACATGTTCACGGACTTCACCAGTGAT
CTACGCGGTCAAGCGGTGGGACTCCGGGCGGAGAGGGATCGGATTCGTGC
GCTCAAGGAGGACATCATCCAGCGCAAGCAGGGAAAGGCAAGCTTTCTAG
ACCAT
FMO07856.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14109-RB | 930 | CG14109-RB | 83..811 | 9..737 | 3630 | 99.9 | Plus |
| CG14109-RA | 877 | CG14109-RA | 30..758 | 9..737 | 3630 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13441625..13442301 | 61..737 | 3370 | 99.9 | Plus |
| 3L | 28110227 | 3L | 13441226..13441279 | 9..62 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:56:20 has no hits.
FMO07856.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:58 Download gff for
FMO07856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14109-RA | 26..763 | 1..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:13 Download gff for
FMO07856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14109-RA | 24..763 | 1..743 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:15 Download gff for
FMO07856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14109-RA | 24..763 | 1..743 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:15 Download gff for
FMO07856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13441220..13441279 | 1..62 | 93 | -> | Plus |
| 3L | 13441627..13442304 | 63..742 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:13 Download gff for
FMO07856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13434320..13434379 | 1..62 | 93 | -> | Plus |
| arm_3L | 13434727..13435404 | 63..742 | 99 | -> | Plus |
