FMO07858.5prime Sequence
891 bp (891 high quality bases) assembled on 2009-08-11
> FMO07858.5prime
CAGTCGACATGAATATTTTACCAAAAAAACGCTGGCATGTGCGTACCAAG
GAGAACATTGCCCGCGTGCGCCGGGATCAAGCGGCTGCCGCAGCAGAAGA
AAAAGTCCGGCAGGAGAAATTGGAATTTGCTGAAAGCGAGGCACGAATCA
ACTTCCTGCGCCGCCAATCGGGCTTGCCGGAGAAGGCCTCCAAGGAATCT
CGAGAGGAGTCGCAATGCAGTACTGAAACAACCAAAGGGGTGGATCTCTT
TGCCGACTACAAGGCGAGAGTGAAGACCACTAACAAAGACTTGGAAAAGG
AGCAAAAGGAGGAGCAGGAGAAGTATGAGAAGCAGATCGGCTACCTCACC
TACTTGGGCCAGGACACCAATGAAGCTTTGAAAGTGCGCAGCTGGTACGA
GTTAGCCCCCAAAAGACCAGAAGTTGGGGATCCCACAGCTACTGAAACTC
ATCATAAGCAAAAGCTAGCCCACGATCCTCTGACCCTAATTAATGCTTTG
TTGCCGCCAGAAAAAAAGGATCCCAAAAAGGCCACAAAAAGAATTCGCGA
AAGGACACCCGCGCCTTCTCAGGAACCTTCAATACCCCACAAGGACAAGA
AATCCAAGAAAGATAAGAAGAAGCACAAGAGCAAAAATGGTTCAAGGGAG
ACCCTTTTGGCCGAGGAACGCATAAAACGAGAAAAGCTCGAGACGCTAAG
AAGGGAGCGCATGCGACGGGAAACAGCGGAACGCCAGCGTTCCGAGGCTC
TGTTCGCACCCAAGGAGCTGCCGGTGGCTGCCAGTGCCGAATCCACGCCG
GCTTCGACGCCTAAGGTTGTCCAAAAGTACAACAGTCAGGTTTAATCCGG
AGTTAGCAAAGCAAAATATGCTCGCAAGCTTTCTAGACCAT
FMO07858.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12818-RA | 1001 | CG12818-RA | 39..902 | 9..873 | 4300 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10331856..10332596 | 132..873 | 3660 | 99.9 | Plus |
| 3R | 32079331 | 3R | 10331697..10331798 | 31..132 | 510 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:35:30 has no hits.
FMO07858.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:27:06 Download gff for
FMO07858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12818-RA | 39..906 | 9..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:29 Download gff for
FMO07858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12818-RA | 39..906 | 9..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:06 Download gff for
FMO07858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12818-RA | 39..906 | 9..879 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:06 Download gff for
FMO07858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10331619..10331641 | 9..31 | 100 | -> | Plus |
| 3R | 10331698..10331797 | 32..131 | 100 | -> | Plus |
| 3R | 10331856..10332600 | 132..879 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:29 Download gff for
FMO07858.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6157341..6157363 | 9..31 | 100 | -> | Plus |
| arm_3R | 6157420..6157519 | 32..131 | 100 | -> | Plus |
| arm_3R | 6157578..6158322 | 132..879 | 99 | | Plus |
