FMO07865.5prime Sequence
344 bp (344 high quality bases) assembled on 2009-08-11
> FMO07865.5prime
CAGTCGACATGTCACCGAAGACTAAAAAAATGATCGTCAAGATTCCGCGC
CATCCCTACTTCAATGTGCAGGGCGAACGGAGCGTGGAGCGCGAGGTGGA
GTACCAGGTCCGAAAGTGTCGCGTGAATCTGGAGCGCATCAAGTCGTCGA
CTTCTCCGAATTCCCGTCCATTCCCGTTAAAACCGAAGCCCAAGAGATGC
ATTGTACGTGTAGCCCGACTGCCGGACGTGGAGCGCAGCGAGATTTCCGT
GACACCGGCCAGTTCCATCATGAATTCCGACATTGACGAGAATAGTGGCA
GCGATCAGGAGTCTAATCTGACAATCGCAAGCTTTCTAGACCAT
FMO07865.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HP4-RA | 643 | CG8044-RA | 110..428 | 8..326 | 1595 | 100 | Plus |
| HP4-RB | 717 | CG8044-RB | 110..397 | 8..295 | 1425 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7975758..7976045 | 295..8 | 1425 | 99.7 | Minus |
Blast to na_te.dros performed 2014-11-28 21:35:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2027..2089 | 72..10 | 108 | 63.5 | Minus |
FMO07865.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:55 Download gff for
FMO07865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hip-RA | 107..425 | 8..326 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:26 Download gff for
FMO07865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP4-RA | 110..428 | 8..326 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:05 Download gff for
FMO07865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP4-RA | 110..428 | 8..326 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:05 Download gff for
FMO07865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7975653..7975687 | 292..326 | 100 | <- | Minus |
| 3L | 7975762..7976045 | 8..291 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:26 Download gff for
FMO07865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7968753..7968787 | 292..326 | 100 | <- | Minus |
| arm_3L | 7968862..7969145 | 8..291 | 100 | | Minus |
