Clone FMO07867 Report

Search the DGRC for FMO07867

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:78
Well:67
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18598-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07867.5prime Sequence

293 bp (293 high quality bases) assembled on 2009-08-11

> FMO07867.5prime
CAGTCGACATGGCACTGCAGCTGCAAATTGAGAAGCTCAAAGGTTTGGAC
AACTACAAGGCCTGGTCGATGACGGTGCGGGCGTATCTGGAGTCGGAGGA
ACTCTGGACGGTGGTGGAGAATGGTCCCGAGAACAACGAGGAGTCCCTGC
TAAAGGACAAGCGGGCCAAGTTCTTGATTCTCTGCCTGATCGAGACCAAG
TTGTGCCAATTCATGGTCAGCATCCGCACGGCTCGGGATCTGTGGAATTA
CTTGCGCACCCAGCATTCGCTGCGTGCAAGCTTTCTAGACCAT

FMO07867.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG18598-RA 360 CG18598-RA 30..296 9..275 1335 100 Plus
CG12320-RB 1666 CG12320-RB 1457..1591 143..9 675 100 Minus
CG12320-RB 1666 CG12320-RB 1260..1393 275..142 670 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18251144..18251278 9..143 675 100 Plus
3R 32079331 3R 18251342..18251475 142..275 670 100 Plus
Blast to na_te.dros performed 2014-11-28 20:30:33
Subject Length Description Subject Range Query Range Score Percent Strand
412 7567 412 412 7567bp 163..212 183..232 106 68 Plus
412 7567 412 412 7567bp 7216..7265 183..232 106 68 Plus

FMO07867.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:53 Download gff for FMO07867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18598-RA 24..302 1..280 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:41 Download gff for FMO07867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18598-RA 24..302 1..280 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:51 Download gff for FMO07867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18598-RA 23..301 1..280 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:51 Download gff for FMO07867.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18251137..18251278 1..143 97 -> Plus
3R 18251344..18251479 144..280 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:41 Download gff for FMO07867.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14076859..14077000 1..143 97 -> Plus
arm_3R 14077066..14077201 144..280 97 -> Plus