FMO07868.5prime Sequence
407 bp (407 high quality bases) assembled on 2009-08-11
> FMO07868.5prime
CAGTCGACATGGAAGGCCAACGCGTGGCAGTCGTCGCATTTGCTGTTTTG
CTCGCCGGATTGTGCGTGCTATCCGGTCTGAATGCGGCACCCGTGGAATG
CAATAATGGCGGTGGCATCCAGATCTCTGACGATGGTTTCCAGAGCCAGA
CGCAAACCGGTCCCGGCTGCCAGACCCAGACCTCCGAGGATGGAACCCAG
AGCCAAAGCCAGAGTCAGTCGGGCAATGGCTACCAATCGCAGACGCAGTG
CAGCGGCTCATCCTGTGGTCAGTTCAACACCTTCCCGCCGCTATTCACCA
TTAAGCCGCTGGAGCCATTGGCACCCATCACTTGGCAGCCATGGGGGCAA
ATGAGGAACAACCAGGTGCAGCAGCAGGTCAATTTTGGCGCAAGCTTTCT
AGACCAT
FMO07868.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5773-RC | 1285 | CG5773-RC | 83..465 | 7..389 | 1915 | 100 | Plus |
CG5773-RB | 514 | CG5773-RB | 83..465 | 7..389 | 1915 | 100 | Plus |
CG5773-RA | 586 | CG5773-RA | 155..537 | 7..389 | 1915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18043116..18043421 | 389..84 | 1530 | 100 | Minus |
2R | 25286936 | 2R | 18043513..18043590 | 84..7 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:35:23 has no hits.
FMO07868.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:52 Download gff for
FMO07868.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5773-RA | 149..548 | 1..403 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:23 Download gff for
FMO07868.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5773-RA | 149..548 | 1..403 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:04 Download gff for
FMO07868.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5773-RA | 149..548 | 1..403 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:04 Download gff for
FMO07868.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18043105..18043421 | 84..403 | 98 | <- | Minus |
2R | 18043514..18043596 | 1..83 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:23 Download gff for
FMO07868.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13930610..13930926 | 84..403 | 98 | <- | Minus |
arm_2R | 13931019..13931101 | 1..83 | 97 | | Minus |