FMO07870.5prime Sequence
725 bp (725 high quality bases) assembled on 2009-08-11
> FMO07870.5prime
CAGTCGACATGTTCAAGTTCGTGTGCCTTTTTGCGCTGATTGCCTCCACG
GCGGCGGCTACCTCGGAAGCGGACAGCTTGCTGACCAGCGCTTTGAAGAT
GGTCAAGGACTGTGGCGAACGGTCCATGGTCTTGTGCATGAAGGAGCGAG
CCCTGCACTACTTCGATGCCGAGAACGGGGATGTGCGGCTCACCGAGGGC
ATTGCCCTGGTCAAGACCGATGAGATCCCGGTGGGTCGATCCCTCAACGA
GATGCAACTGCCCGAGGAGGTTGAGGCCCGGGAGGCCGAGGTGGACTCCC
TGCTGGTGGAGCGCGTTGCCCGCTTCTTCGGCACCCACACGCTGCAGTTC
AAGGTGCCCAAAGACTCCATCCAGGACATGCAGCGCGCCCTCGAGGAATC
TCGCGGCAAGAAGAAGGAGAAGAAGAAGTACCTGATGCCCCTGCTAATGC
TCTTCAAGCTGAAGATGGCCGCCCTGCTGCCCCTGGCCATTGGCTTCCTG
GCCCTGATCTCCTTCAAGGCCCTGGTCATCGGCAAGATCGCCCTGCTGCT
CTCCGGCATCATTGGGCTGAAGAAACTGCTCGAGTCGAAGAAGGAGAACT
ACGAGGTCGTTGCGCACCCGCACTACGAGCACGAGCACAGCTACGGCCGC
TCGCTGCCATCTGATGACTCCCAGGCCCAGCAGCTGGCCTATGCGGCGTA
TAAGCAAGCAAGCTTTCTAGACCAT
FMO07870.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osi9-RA | 1360 | CG15592-RA | 202..901 | 8..707 | 3500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6261339..6261646 | 400..707 | 1540 | 100 | Plus |
3R | 32079331 | 3R | 6260607..6260865 | 141..399 | 1295 | 100 | Plus |
3R | 32079331 | 3R | 6260412..6260548 | 8..144 | 685 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:00:22 has no hits.
FMO07870.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:57 Download gff for
FMO07870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi9-RA | 193..905 | 1..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:08 Download gff for
FMO07870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi9-RA | 195..907 | 1..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:34 Download gff for
FMO07870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osi9-RA | 195..907 | 1..714 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:34 Download gff for
FMO07870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6260405..6260547 | 1..143 | 97 | -> | Plus |
3R | 6260610..6260865 | 144..399 | 100 | -> | Plus |
3R | 6261339..6261652 | 400..714 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:08 Download gff for
FMO07870.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2086127..2086269 | 1..143 | 97 | -> | Plus |
arm_3R | 2086332..2086587 | 144..399 | 100 | -> | Plus |
arm_3R | 2087061..2087374 | 400..714 | 99 | | Plus |