FMO07871.5prime Sequence
263 bp (263 high quality bases) assembled on 2009-08-11
> FMO07871.5prime
CAGTCGACATGAAATACCTAGTCGTTTTTGCACTCATCTGCTGTCTTGTG
GCATCAGCATTTGCGACTTTGAAAAACCCAATCTGTGGCGAGGAGTTTGG
CGTCAAGGGTACTTGCCGTTCCCTGCAACCCATGTGGACCTATCGCCCAG
ATACGAACGAGTGCTTCACCTTCAATTACTCCGGCTGCCACGGAAACAAT
AATCTATTCCACAAAAAGTTGGAGTGCGAAGAAAAATGCAAAATAGCAAG
CTTTCTAGACCAT
FMO07871.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16704-RB | 350 | CG16704-RB | 48..284 | 9..245 | 1185 | 100 | Plus |
CG16704-RA | 335 | CG16704-RA | 48..284 | 9..245 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3692189..3692355 | 245..79 | 835 | 100 | Minus |
2L | 23513712 | 2L | 3692471..3692540 | 78..9 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:13:34 has no hits.
FMO07871.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:37:23 Download gff for
FMO07871.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16704-RA | 41..289 | 1..250 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:23 Download gff for
FMO07871.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16704-RA | 40..288 | 1..250 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:35 Download gff for
FMO07871.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16704-RA | 40..288 | 1..250 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:35 Download gff for
FMO07871.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3692190..3692355 | 79..244 | 100 | <- | Minus |
2L | 3692471..3692546 | 1..78 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:23 Download gff for
FMO07871.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3692190..3692355 | 79..244 | 100 | <- | Minus |
arm_2L | 3692471..3692546 | 1..78 | 94 | | Minus |